RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CNTN5O94779 1100 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 HEXIM1O94992 359 aaKnown RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 KAT7O95251 611 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 KELP23276 732 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 ATP5F1P24539 256 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 EPHB2P29323 1055 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 MPGP29372 298 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 SOX2P48431 317 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 PPM1FP49593 454 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 PAPOLAP51003 745 aaKnown RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 RBM5P52756 815 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 PRKAA2P54646 552 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 RPS13P62277 151 aaKnown RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 YPEL5P62699 121 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 MTA1Q13330 715 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 CUL4BQ13620 913 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 DAZAP2Q15038 168 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 EZH2Q15910 746 aaKnown RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 EARS2Q5JPH6 523 aaKnown RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 FBXO47Q5MNV8 452 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 SLC18B1Q6NT16 456 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 ZNF474Q6S9Z5 364 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 DHRS13Q6UX07 377 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 ANKS1BQ7Z6G8 1248 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 YTHDF3Q7Z739 585 aaKnown RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 ZNF354CQ86Y25 554 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 FTSJ3Q8IY81 847 aaKnown RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 ADGRF3Q8IZF5 1079 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 CPXCR1Q8N123 301 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 PTGR2Q8N8N7 351 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 ENDOVQ8N8Q3 282 aaKnown RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 SPATA3Q8NHX4 192 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 ZFPM2Q8WW38 1151 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 CUL5Q93034 780 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 PKNOX2Q96KN3 472 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 PRSS22Q9GZN4 317 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 NRIP3Q9NQ35 241 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 RASSF1Q9NS23 344 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 IPO11Q9UI26 975 aaKnown RBP3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 KCND3Q9UK17 655 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 LZTS1Q9Y250 596 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 GPR52Q9Y2T5 361 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 PCDHGB3Q9Y5G1 929 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 DGKBQ9Y6T7 804 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 FHAD1B1AJZ9 1412 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 MAPKBP1O60336 1514 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 ABCA10Q8WWZ4 1543 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 LOC102724159A0A0B4J2E5 919 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 AGAP5A6NIR3 686 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 CCER2I3L3R5 266 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 ALDOCP09972 364 aaKnown RBP3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 TNNT1P13805 278 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 HOXA7P31268 230 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 OAZ1P54368 228 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 CFHR1Q03591 330 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 BIRC3Q13489 604 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 STIM1Q13586 685 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 RAPGEF1Q13905 1077 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 PWP2Q15269 919 aaKnown RBP3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 TAF5Q15542 800 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 SRSF7Q16629 238 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 TMEM95Q3KNT9 176 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 SLC9C1Q4G0N8 1177 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 LIPMQ5VYY2 423 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 MORN5Q5VZ52 161 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 DEF8Q6ZN54 512 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 RHPN2Q8IUC4 686 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 SMAP1Q8IYB5 467 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 PAQR4Q8N4S7 273 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 TMEM57Q8N5G2 664 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 MYRIPQ8NFW9 859 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 OR52N4Q8NGI2 321 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 CLEC4CQ8WTT0 213 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 AFG1LQ8WV93 481 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 DDB2Q92466 427 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 ATP2A3Q93084 1043 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 GCC1Q96CN9 775 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 KTI12Q96EK9 354 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 ZSCAN31Q96LW9 406 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 QTRT1Q9BXR0 403 aaKnown RBP3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 PDE11AQ9HCR9 933 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 ITM2CQ9NQX7 267 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 PDGFCQ9NRA1 345 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 LUZP4Q9P127 313 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 DERAQ9Y315 318 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 SETD5Q9C0A6 1442 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 ZNF335Q9H4Z2 1342 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 LRRC9Q6ZRR7 1453 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 LMTK3Q96Q04 1460 aa3.66□□□□□ -1.82
HMGB1P41-201ENST00000520234 CASKIN1Q8WXD9 1431 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 SAC3D1A6NKF1 404 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 CGB1A6NKQ9 187 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 C2CD4BA6NLJ0 364 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 MCIDASD6RGH6 385 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 KRT38O76015 456 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 CYP21A2P08686 494 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 PRR35P0CG20 571 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 CHN1P15882 459 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 ST6GAL1P15907 406 aa3.65□□□□□ -1.83
HMGB1P41-201ENST00000520234 HOXB9P17482 250 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms