RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 SFSWAPQ12872 951 aaKnown RBP18.24■□□□□ 0.51
SIL1-215ENST00000515008 KRT31Q15323 416 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 BRMS1LQ5PSV4 323 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 FKBP15Q5T1M5 1219 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 RNF219Q5W0B1 726 aaPredicted RBP18.24■□□□□ 0.51
SIL1-215ENST00000515008 MMS22LQ6ZRQ5 1243 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 ZNF677Q86XU0 584 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 CCAR2Q8N163 923 aaKnown RBP18.24■□□□□ 0.51
SIL1-215ENST00000515008 MINDY1Q8N5J2 469 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 C18orf8Q96DM3 657 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 PGAP3Q96FM1 320 aaPredicted RBP18.24■□□□□ 0.51
SIL1-215ENST00000515008 PPP1R9BQ96SB3 815 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 GTPBP2Q9BX10 602 aaKnown RBP18.24■□□□□ 0.51
SIL1-215ENST00000515008 GANQ9H2C0 597 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 SLC32A1Q9H598 525 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 DNAAF2Q9NVR5 837 aaKnown RBP18.24■□□□□ 0.51
SIL1-215ENST00000515008 ANO10Q9NW15 660 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.24■□□□□ 0.51
SIL1-215ENST00000515008 COX16Q9P0S2 106 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 ANGPTL2Q9UKU9 493 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 PAXBP1Q9Y5B6 917 aa18.24■□□□□ 0.51
SIL1-215ENST00000515008 NYNRINQ9P2P1 1898 aaKnown RBP18.24■□□□□ 0.51
SIL1-215ENST00000515008 EDDM13A0A1B0GTR0 161 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 M0QYT0 321 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 RNASEH1O60930 286 aaKnown RBP18.23■□□□□ 0.51
SIL1-215ENST00000515008 PLK1P53350 603 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 SEMA3BQ13214 749 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 NME3Q13232 169 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 ACBD5Q5T8D3 534 aaPredicted RBP18.23■□□□□ 0.51
SIL1-215ENST00000515008 FBXL22Q6P050 247 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 SASS6Q6UVJ0 657 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 USP30Q70CQ3 517 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 FAM124AQ86V42 546 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 ERICH1Q86X53 443 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 ANKRD20A12PQ8NF67 263 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 EPS8L1Q8TE68 723 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 RPRD1AQ96P16 312 aaPredicted RBP18.23■□□□□ 0.51
SIL1-215ENST00000515008 NPY6RQ99463 290 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 BTBD1Q9H0C5 482 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 SGK2Q9HBY8 427 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 FSCN3Q9NQT6 498 aa18.23■□□□□ 0.51
SIL1-215ENST00000515008 BCAT2O15382 392 aaPredicted RBP18.22■□□□□ 0.51
SIL1-215ENST00000515008 SIN3BO75182 1162 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 SEMA4FO95754 770 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 MBD3O95983 291 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 F9P00740 461 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 MAOBP27338 520 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 NNMTP40261 264 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 VASPP50552 380 aaPredicted RBP18.22■□□□□ 0.51
SIL1-215ENST00000515008 MYL5Q02045 173 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 ZNF252P-AS1Q0IIN9 211 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 SLC14A1Q13336 389 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 AUHQ13825 339 aaKnown RBP18.22■□□□□ 0.51
SIL1-215ENST00000515008 STX1AQ16623 288 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 FAM102AQ5T9C2 384 aaPredicted RBP18.22■□□□□ 0.51
SIL1-215ENST00000515008 OTUD1Q5VV17 481 aaPredicted RBP18.22■□□□□ 0.51
SIL1-215ENST00000515008 TAF3Q5VWG9 929 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 SND1Q7KZF4 910 aaKnown RBP eCLIP18.22■□□□□ 0.511e-9■■■■□ 24.3
SIL1-215ENST00000515008 PIP4P1Q86T03 277 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 NOP9Q86U38 636 aaKnown RBP18.22■□□□□ 0.51
SIL1-215ENST00000515008 XYLT1Q86Y38 959 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 ZCCHC9Q8N567 271 aaKnown RBP18.22■□□□□ 0.51
SIL1-215ENST00000515008 NT5C3BQ969T7 300 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 VPS16Q9H269 839 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 PABPC3Q9H361 631 aaKnown RBP18.22■□□□□ 0.51
SIL1-215ENST00000515008 ARHGEF38Q9NXL2 777 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 NCKAP1Q9Y2A7 1128 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 HS3ST4Q9Y661 456 aa18.22■□□□□ 0.51
SIL1-215ENST00000515008 GIPC1O14908 333 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 PAGE1O75459 146 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 CLDN11O75508 207 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 PDGFRAP16234 1089 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 ACSL1P33121 698 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 CTSOP43234 321 aaPredicted RBP18.21■□□□□ 0.51
SIL1-215ENST00000515008 CXCR3P49682 368 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 SULT1E1P49888 294 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 NOMO3P69849 1222 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 GRIK2Q13002 908 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 HNRNPDQ14103 355 aaKnown RBP18.21■□□□□ 0.51
SIL1-215ENST00000515008 SLC25A52Q3SY17 297 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 C5orf22Q49AR2 442 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 C9orf64Q5T6V5 341 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 CXorf57Q6NSI4 855 aaKnown RBP18.21■□□□□ 0.51
SIL1-215ENST00000515008 ARCQ7LC44 396 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 CIR1Q86X95 450 aaPredicted RBP18.21■□□□□ 0.51
SIL1-215ENST00000515008 DHX40Q8IX18 779 aaKnown RBP18.21■□□□□ 0.51
SIL1-215ENST00000515008 APCDD1Q8J025 514 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 DEFB124Q8NES8 71 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 CNTNAP3BQ96NU0 1288 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 CNTNAP3Q9BZ76 1288 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 MIR1-1HGQ9H1L0 117 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 WDCPQ9H6R7 721 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 OSGEPQ9NPF4 335 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 PIGVQ9NUD9 493 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 VANGL2Q9ULK5 521 aa18.21■□□□□ 0.51
SIL1-215ENST00000515008 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.21■□□□□ 0.51
SIL1-215ENST00000515008 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.2■□□□□ 0.5
SIL1-215ENST00000515008 TTC34A8MYJ7 566 aa18.2■□□□□ 0.5
SIL1-215ENST00000515008 GJB3O75712 270 aa18.2■□□□□ 0.5
SIL1-215ENST00000515008 CDH4P55283 916 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms