RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 MICU2Q8IYU8 434 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 MIER2Q8N344 545 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 PHACTR1Q9C0D0 580 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 MMADHCQ9H3L0 296 aaPredicted RBP8.21□□□□□ -1.09
NEK1-208ENST00000512193 IL1RAPL1Q9NZN1 696 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 BTBD7Q9P203 1132 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 LSM7Q9UK45 103 aaKnown RBP8.21□□□□□ -1.09
NEK1-208ENST00000512193 XRN1Q8IZH2 1706 aaKnown RBP8.21□□□□□ -1.09
NEK1-208ENST00000512193 FAM95CA0A1B0GW59 222 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 CLDN5O00501 218 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 EPHA3P29320 983 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 MSX2P35548 267 aaPredicted RBP8.21□□□□□ -1.09
NEK1-208ENST00000512193 SKIV2L2P42285 1042 aaKnown RBP8.21□□□□□ -1.09
NEK1-208ENST00000512193 SLC11A2P49281 568 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 RPL14P50914 215 aaKnown RBP8.21□□□□□ -1.09
NEK1-208ENST00000512193 TAF5Q15542 800 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 C9orf131Q5VYM1 1079 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 ADCK1Q86TW2 530 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 UNC93AQ86WB7 457 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 ANKRD52Q8NB46 1076 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 RAET1EQ8TD07 263 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 CLEC4DQ8WXI8 215 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 GFM2Q969S9 779 aaKnown RBP8.21□□□□□ -1.09
NEK1-208ENST00000512193 HSFY1Q96LI6 401 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 ZNF670Q9BS34 389 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 ACE2Q9BYF1 805 aaPredicted RBP8.21□□□□□ -1.09
NEK1-208ENST00000512193 COG4Q9H9E3 785 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 MID1IP1Q9NPA3 183 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 PDGFCQ9NRA1 345 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 RGS18Q9NS28 235 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 PNPOQ9NVS9 261 aa8.21□□□□□ -1.09
NEK1-208ENST00000512193 COL1A1P02452 1464 aaPredicted RBP8.21□□□□□ -1.09
NEK1-208ENST00000512193 EME2A4GXA9 379 aaPredicted RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 CBX4O00257 560 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 GSC2O15499 205 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 PAPSS1O43252 624 aaPredicted RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 FARP2O94887 1054 aaPredicted RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 CDH2P19022 906 aaPredicted RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 TSPAN8P19075 237 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 IFNA8P32881 189 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 CLK1P49759 484 aaKnown RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 NOMO1Q15155 1222 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 NR6A1Q15406 480 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 ATP6AP1LQ52LC2 224 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 MAP1SQ66K74 1059 aaPredicted RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 ZNF410Q86VK4 478 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 ELMOD1Q8N336 334 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 SPATA6LQ8N4H0 392 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 SLC44A1Q8WWI5 657 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 GLT1D1Q96MS3 346 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 RBBP8Q99708 897 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 UBXN6Q9BZV1 441 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 SYTL2Q9HCH5 934 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 VTA1Q9NP79 307 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 ACSS2Q9NR19 701 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 PNMA8BQ9ULN7 279 aaPredicted RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 C2CD2Q9Y426 696 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 FARP1Q9Y4F1 1045 aaPredicted RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 PPP2R3BQ9Y5P8 575 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 PLIN4Q96Q06 1357 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 KDM4FA0A1W2PPD8 638 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 RAMP2O60895 175 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 TOMM70O94826 608 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 PGM3O95394 542 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 ASMTLO95671 621 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 CYBBP04839 570 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 SERPINF2P08697 491 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 NPR3P17342 541 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 ATP6V1B2P21281 511 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 FGFR3P22607 806 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 MMP14P50281 582 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 HADHBP55084 474 aaKnown RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 BEX3Q00994 111 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 NFE2Q16621 373 aaPredicted RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 RNASEH2BQ5TBB1 312 aaKnown RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 AMIGO3Q86WK7 504 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 PLD3Q8IV08 490 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 GSTCDQ8NEC7 633 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 SMARCD1Q96GM5 515 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 CLPTM1LQ96KA5 538 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 POMKQ9H5K3 350 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 WDR41Q9HAD4 459 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 TBC1D13Q9NVG8 400 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 VTI1BQ9UEU0 232 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 FAM32AQ9Y421 112 aaKnown RBP8.21□□□□□ -1.1
NEK1-208ENST00000512193 PCDHA11Q9Y5I1 949 aa8.21□□□□□ -1.1
NEK1-208ENST00000512193 PRPF4O43172 522 aaKnown RBP eCLIP8.2□□□□□ -1.1
NEK1-208ENST00000512193 ANPEPP15144 967 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 TSHRP16473 764 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 ITGB6P18564 788 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 ATP4AP20648 1035 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 CRABP2P29373 138 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 FOXN2P32314 431 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 EPHX2P34913 555 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 CTBP1Q13363 440 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 CDH18Q13634 790 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 SNX17Q15036 470 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 PRAMEF19Q5SWL8 479 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 DNAJC14Q6Y2X3 702 aaPredicted RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 C10orf107Q8IVU9 208 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms