RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 FHOD1Q9Y613 1164 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 CLIC4Q9Y696 253 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 ASH1LQ9NR48 2969 aaKnown RBP7.07□□□□□ -1.28
COPS4-209ENST00000511653 ATXN2Q99700 1313 aaKnown RBP7.07□□□□□ -1.28
COPS4-209ENST00000511653 A0A087X0B3 334 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 BLACEA4D250 179 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 SGK1O00141 431 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 LEFTY2O00292 366 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 PRODHO43272 600 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 PRPF6O94906 941 aaKnown RBP7.06□□□□□ -1.28
COPS4-209ENST00000511653 NFATC1O95644 943 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 TMEM191BP0C7N4 346 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 HDCP19113 662 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 MAGEA11P43364 429 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 SLC6A11P48066 632 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 DHPSP49366 369 aaPredicted RBP7.06□□□□□ -1.28
COPS4-209ENST00000511653 IRX4P78413 519 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 POSTNQ15063 836 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 CRY1Q16526 586 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 PRSS53Q2L4Q9 553 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 FAM173BQ6P4H8 233 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 CRTC3Q6UUV7 619 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 TTC30AQ86WT1 665 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 MFSD4AQ8N468 514 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 ALLCQ8N6M5 410 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 DEFB124Q8NES8 71 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 HPS3Q969F9 1004 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 FUBP3Q96I24 572 aaKnown RBP eCLIP7.06□□□□□ -1.28
COPS4-209ENST00000511653 RCC1LQ96I51 464 aaKnown RBP7.06□□□□□ -1.28
COPS4-209ENST00000511653 CLUHP3Q96NS8 147 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 ACCSQ96QU6 501 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 FNBP1Q96RU3 617 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 AARSD1Q9BTE6 412 aaKnown RBP7.06□□□□□ -1.28
COPS4-209ENST00000511653 RNF38Q9H0F5 515 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 TMEM9BQ9NQ34 198 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 OLFML3Q9NRN5 406 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 SMPD4Q9NXE4 827 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 SMC3Q9UQE7 1217 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 KNTC1P50748 2209 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 PLXNB3Q9ULL4 1909 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 TENM4Q6N022 2769 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 PTPRBP23467 1997 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 TP53BP1Q12888 1972 aaPredicted RBP7.06□□□□□ -1.28
COPS4-209ENST00000511653 FRMD3A2A2Y4 597 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 F8VP50 259 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 SIGLEC6O43699 453 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 OLFM2O95897 454 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 BMP15O95972 392 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 PDGFRBP09619 1106 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 IDEP14735 1019 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 GAP43P17677 238 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 FSTP19883 344 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 PCSK1P29120 753 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 PTGER3P43115 390 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 LHX1P48742 406 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 GYS2P54840 703 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 RBP5P82980 135 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 KDSRQ06136 332 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 DPY19L1Q2PZI1 675 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 UAP1L1Q3KQV9 507 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 USP39Q53GS9 565 aaKnown RBP7.06□□□□□ -1.28
COPS4-209ENST00000511653 EMC10Q5UCC4 262 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 CDKAL1Q5VV42 579 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 DAB2IPQ5VWQ8 1189 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 GTF2IRD2BQ6EKJ0 949 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 DENND5BQ6ZUT9 1274 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 C22orf34Q6ZV56 151 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 BRAPQ7Z569 592 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 GTF2IRD2Q86UP8 949 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 CBWD2Q8IUF1 395 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 SPACA3Q8IXA5 215 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 FSIP1Q8NA03 581 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 IL17RCQ8NAC3 791 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 TXNDC5Q8NBS9 432 aaKnown RBP7.06□□□□□ -1.28
COPS4-209ENST00000511653 GIMAP7Q8NHV1 300 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 OLIG1Q8TAK6 271 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 SPATA18Q8TC71 538 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 CACTINQ8WUQ7 758 aaKnown RBP7.06□□□□□ -1.28
COPS4-209ENST00000511653 PIGKQ92643 395 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 EXOC4Q96A65 974 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 PCED1BQ96HM7 432 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 HPDLQ96IR7 371 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 SPATA17Q96L03 361 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 MRPL45Q9BRJ2 306 aaKnown RBP7.06□□□□□ -1.28
COPS4-209ENST00000511653 SCNM1Q9BWG6 230 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 TTLL2Q9BWV7 592 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 LRRC4CQ9HCJ2 640 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 FSCN3Q9NQT6 498 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 TMEM74BQ9NUR3 256 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 INTS13Q9NVM9 706 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 SEL1LQ9UBV2 794 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 MBD1Q9UIS9 605 aaPredicted RBP7.06□□□□□ -1.28
COPS4-209ENST00000511653 EXOC7Q9UPT5 735 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 GPR55Q9Y2T6 319 aaPredicted RBP7.06□□□□□ -1.28
COPS4-209ENST00000511653 CPQQ9Y646 472 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 MGAQ8IWI9 3026 aa7.06□□□□□ -1.28
COPS4-209ENST00000511653 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.05□□□□□ -1.28
COPS4-209ENST00000511653 TRAV20A0A0B4J274 112 aa7.05□□□□□ -1.28
COPS4-209ENST00000511653 VPS37CA5D8V6 355 aaPredicted RBP7.05□□□□□ -1.28
COPS4-209ENST00000511653 ZNF840PA6NDX5 716 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms