RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 NPC1O15118 1278 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 AP5Z1O43299 807 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 RTN2O75298 545 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 SERPING1P05155 500 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 ATP5BP06576 529 aaKnown RBP14.4□□□□□ -0.1
DDX41-212ENST00000511040 EPHX1P07099 455 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 DLDP09622 509 aaKnown RBP14.4□□□□□ -0.1
DDX41-212ENST00000511040 ZNF143P52747 638 aaPredicted RBP14.4□□□□□ -0.1
DDX41-212ENST00000511040 MTA1Q13330 715 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 ZNF177Q13360 481 aaPredicted RBP14.4□□□□□ -0.1
DDX41-212ENST00000511040 ENPP2Q13822 863 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 TTC39BQ5VTQ0 682 aaPredicted RBP14.4□□□□□ -0.1
DDX41-212ENST00000511040 SPECC1LQ69YQ0 1117 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 LRRC31Q6UY01 552 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 TFAP2DQ7Z6R9 452 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 VSTM4Q8IW00 320 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 RUBCNQ92622 972 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 CENPIQ92674 756 aaPredicted RBP14.4□□□□□ -0.1
DDX41-212ENST00000511040 TTC17Q96AE7 1141 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 ZNF653Q96CK0 615 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 IQCDQ96DY2 449 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 HAPLN3Q96S86 360 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 RBSNQ9H1K0 784 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 CD93Q9NPY3 652 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 MYO1AQ9UBC5 1043 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 ADAMTS1Q9UHI8 967 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 GMEB2Q9UKD1 530 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 MYO15AQ9UKN7 3530 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 GPR179Q6PRD1 2367 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 MOCS3O95396 460 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 GZMAP12544 262 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 ADRA1BP35368 520 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 MAP7D1Q3KQU3 841 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 PLEKHG6Q3KR16 790 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 PLK5Q496M5 336 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 C5orf22Q49AR2 442 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 ARTNQ5T4W7 220 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 RNF219Q5W0B1 726 aaPredicted RBP14.39□□□□□ -0.11
DDX41-212ENST00000511040 LAIR1Q6GTX8 287 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 PLEKHA7Q6IQ23 1121 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 PPP1R2P3Q6NXS1 205 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 SCYL2Q6P3W7 929 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 STRADAQ7RTN6 431 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 VCPIP1Q96JH7 1222 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 MRGPRX1Q96LB2 322 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 C1orf74Q96LT6 269 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 TRIM7Q9C029 511 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 MKRN2Q9H000 416 aaKnown RBP14.39□□□□□ -0.11
DDX41-212ENST00000511040 TMEM245Q9H330 911 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 PARVAQ9NVD7 372 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 CNOT8Q9UFF9 292 aaKnown RBP14.39□□□□□ -0.11
DDX41-212ENST00000511040 MBD1Q9UIS9 605 aaPredicted RBP14.39□□□□□ -0.11
DDX41-212ENST00000511040 ERVW-1Q9UQF0 538 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 BZW2Q9Y6E2 419 aaKnown RBP14.39□□□□□ -0.11
DDX41-212ENST00000511040 SDK1Q7Z5N4 2213 aa14.39□□□□□ -0.11
DDX41-212ENST00000511040 MUC22E2RYF6 1773 aaPredicted RBP14.39□□□□□ -0.11
DDX41-212ENST00000511040 A0A087X0T9 212 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 DRGXA6NNA5 263 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 FAM72CH0Y354 149 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 MAP3K13O43283 966 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 CLDN11O75508 207 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 RHOCP08134 193 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 FAM228BP0C875 321 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 PSMA2P25787 234 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 EIF4A3P38919 411 aaKnown RBP14.38□□□□□ -0.11
DDX41-212ENST00000511040 P2RY2P41231 377 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 STK19P49842 368 aaPredicted RBP14.38□□□□□ -0.11
DDX41-212ENST00000511040 CDH4P55283 916 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 ECT2LQ008S8 904 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 E2F5Q15329 346 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 CCDC6Q16204 474 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 ARL13BQ3SXY8 428 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 FAM72AQ5TYM5 149 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 FAM72DQ6L9T8 149 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 TMC6Q7Z403 805 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 VPS36Q86VN1 386 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 FAM72BQ86X60 149 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 DEFB119Q8N690 84 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 SPACA7Q96KW9 195 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 RPL10LQ96L21 214 aaKnown RBP14.38□□□□□ -0.11
DDX41-212ENST00000511040 MRGPRX3Q96LB0 322 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 CNPY3Q9BT09 278 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 DUSP15Q9H1R2 295 aaPredicted RBP14.38□□□□□ -0.11
DDX41-212ENST00000511040 PRDM16Q9HAZ2 1276 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 TMEM51Q9NW97 253 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 ARHGAP20Q9P2F6 1191 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 SLCO3A1Q9UIG8 710 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 CYP8B1Q9UNU6 501 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 PIEZO1Q92508 2521 aa14.38□□□□□ -0.11
DDX41-212ENST00000511040 USP34Q70CQ2 3546 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 TTC34A8MYJ7 566 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 ASLP04424 464 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 ADKP55263 362 aaKnown RBP14.37□□□□□ -0.11
DDX41-212ENST00000511040 ST8SIA6P61647 398 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 ZNF252P-AS1Q0IIN9 211 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 SPEM2Q0P670 501 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 TRIM14Q14142 442 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 ELF2Q15723 593 aa14.37□□□□□ -0.11
DDX41-212ENST00000511040 RWDD4Q6NW29 188 aaKnown RBP14.37□□□□□ -0.11
DDX41-212ENST00000511040 GAS2L3Q86XJ1 694 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms