RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 CNGB3Q9NQW8 809 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 JCADQ9P266 1359 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 PNMA8CA0A1B0GUJ8 204 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 DYRK3O43781 588 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 RBL1P28749 1068 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 HK2P52789 917 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 FCGRTP55899 365 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 HUNKP57058 714 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 TSNQ15631 228 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 ZCCHC8Q6NZY4 707 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 ZPBP2Q6X784 338 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 ARHGAP22Q7Z5H3 698 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 TFAP2DQ7Z6R9 452 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 YTHDF3Q7Z739 585 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 ZDHHC13Q8IUH4 622 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 TMEM132CQ8N3T6 1108 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 CYP2W1Q8TAV3 490 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 CDHR5Q9HBB8 845 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 RAD18Q9NS91 495 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 SIK3Q9Y2K2 1263 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 KCNK1O00180 336 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 SPTLC1O15269 473 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 SNX3O60493 162 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 CSDE1O75534 798 aaKnown RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 PIGNO95427 931 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 GUCA1AP43080 201 aaPredicted RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 ALDH9A1P49189 494 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 CBWD6Q4V339 395 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 RETSATQ6NUM9 610 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 FAM180AQ6UWF9 173 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 NEK10Q6ZWH5 1172 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 SCUBE3Q8IX30 993 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 DEFB106AQ8N104 65 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 PYDC1Q8WXC3 89 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 VAT1Q99536 393 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 SORCS3Q9UPU3 1222 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 E9PCH4 1651 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 GAKO14976 1311 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 LRRC10BA6NIK2 292 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 PTGES3LE9PB15 166 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 ANXA6P08133 673 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 NEK3P51956 506 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 TRAF3Q13114 568 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 MTA1Q13330 715 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 CNGA2Q16280 664 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 WDR59Q6PJI9 974 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 ZNF438Q7Z4V0 828 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 MED8Q96G25 268 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 FBXO44Q9H4M3 255 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 XPNPEP3Q9NQH7 507 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 STK39Q9UEW8 545 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 SPATA2Q9UM82 520 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 CD3EAPO15446 510 aaKnown RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 RNASEH1O60930 286 aaKnown RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 LTFP02788 710 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 HMGCRP04035 888 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 HOXB8P17481 243 aaPredicted RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 ACAT1P24752 427 aaKnown RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 GSSP48637 474 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 SLC12A3P55017 1021 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 MRPS22P82650 360 aaKnown RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 NIPA1Q7RTP0 329 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 TLK2Q86UE8 772 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 BHLHE22Q8NFJ8 381 aaPredicted RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 PIK3R5Q8WYR1 880 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 SMARCD1Q96GM5 515 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 GINS4Q9BRT9 223 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 H3BRB1 525 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 TPP1O14773 563 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 TGFB3P10600 412 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 INSRRP14616 1297 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 ALOX12P18054 663 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 KDELR1P24390 212 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 LRPAP1P30533 357 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 OR1E1P30953 314 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 EPHB3P54753 998 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 PKNOX1P55347 436 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 SFSWAPQ12872 951 aaKnown RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 SPANXN2Q5MJ10 180 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 OVOS1Q6IE37 1185 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 C11orf88Q6PI97 169 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 DNAJC14Q6Y2X3 702 aaPredicted RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 MTSS1LQ765P7 747 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 SERPINB11Q96P15 392 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 TUT1Q9H6E5 874 aaKnown RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 ARMC7Q9H6L4 198 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 FANCEQ9HB96 536 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 ETNK2Q9NVF9 386 aa10.79□□□□□ -0.68
NEK1-206ENST00000510533 TIMM13Q9Y5L4 95 aaPredicted RBP10.79□□□□□ -0.68
NEK1-206ENST00000510533 SMIM31A0A1B0GVY4 71 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 SRRM3A6NNA2 597 aaPredicted RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 IFRD1O00458 451 aaPredicted RBP10.78□□□□□ -0.68
NEK1-206ENST00000510533 RGS14O43566 566 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 GJB6O95452 261 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 URODP06132 367 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 YBX3P16989 372 aaKnown RBP eCLIP10.78□□□□□ -0.68
NEK1-206ENST00000510533 PRKCIP41743 596 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 SH3RF1Q7Z6J0 888 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 MAP4K3Q8IVH8 894 aa10.78□□□□□ -0.68
NEK1-206ENST00000510533 TMEM159Q96B96 161 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms