RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 VAV1P15498 845 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 SDC4P31431 198 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 RDXP35241 583 aaKnown RBP13.99□□□□□ -0.17
SNF8-206ENST00000509989 PTPN9P43378 593 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 COPAP53621 1224 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 ZBED6P86452 979 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 MAMLD1Q13495 774 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 CDH18Q13634 790 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 PLK5Q496M5 336 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 HSF5Q4G112 596 aaPredicted RBP13.99□□□□□ -0.17
SNF8-206ENST00000509989 BRMS1LQ5PSV4 323 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 DNAJC24Q6P3W2 148 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 CEP68Q76N32 757 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 CPNE8Q86YQ8 564 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 AHI1Q8N157 1196 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 PGBD3Q8N328 593 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 KCNV2Q8TDN2 545 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 TTC17Q96AE7 1141 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 RPL10LQ96L21 214 aaKnown RBP13.99□□□□□ -0.17
SNF8-206ENST00000509989 MRGPRX1Q96LB2 322 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 DDX50Q9BQ39 737 aaKnown RBP13.99□□□□□ -0.17
SNF8-206ENST00000509989 POLMQ9NP87 494 aaPredicted RBP13.99□□□□□ -0.17
SNF8-206ENST00000509989 NDFIP2Q9NV92 336 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 RRN3Q9NYV6 651 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 BCCIPQ9P287 314 aaKnown RBP eCLIP13.99□□□□□ -0.17
SNF8-206ENST00000509989 ZNF212Q9UDV6 495 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 ADAMTS1Q9UHI8 967 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 NEU3Q9UQ49 428 aa13.99□□□□□ -0.17
SNF8-206ENST00000509989 SPTBN4Q9H254 2564 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 ITIH6Q6UXX5 1313 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 CCDC163A0A0D9SF12 145 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 DRGXA6NNA5 263 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 TTC34A8MYJ7 566 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 E9PAM4 449 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 SRGAP2O75044 1071 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 EPHX1P07099 455 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 GLDCP23378 1020 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 ADRA1BP35368 520 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 P2RY2P41231 377 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 SPEM2Q0P670 501 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 PLEKHG6Q3KR16 790 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 PREPLQ4J6C6 727 aaPredicted RBP13.98□□□□□ -0.17
SNF8-206ENST00000509989 FNDC3BQ53EP0 1204 aaKnown RBP13.98□□□□□ -0.17
SNF8-206ENST00000509989 TDRD12Q587J7 1177 aaKnown RBP13.98□□□□□ -0.17
SNF8-206ENST00000509989 PLEKHA7Q6IQ23 1121 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 SERPINA13PQ6UXR4 307 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 NUDT18Q6ZVK8 323 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 TFAP2DQ7Z6R9 452 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 VSTM4Q8IW00 320 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 KIAA2013Q8IYS2 634 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 CCDC26Q8TAB7 109 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 WFIKKN2Q8TEU8 576 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 ARHGEF26Q96DR7 871 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 PEBP4Q96S96 227 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 PSMB7Q99436 277 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 NUP58Q9BVL2 599 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 SEMA4AQ9H3S1 761 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 GPATCH2LQ9NWQ4 482 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 MYO1AQ9UBC5 1043 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 SLC12A6Q9UHW9 1150 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 NENFQ9UMX5 172 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 ERVW-1Q9UQF0 538 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 OR51B4Q9Y5P0 310 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 ACTL7AQ9Y615 435 aa13.98□□□□□ -0.17
SNF8-206ENST00000509989 IGLV3-10A0A075B6K4 115 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 A0A0D9SEW6 157 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 A0A1B0GVM2 712 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 TCAF2A6NFQ2 919 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 RNF103O00237 685 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 SNAP91O60641 907 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 F9P00740 461 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 DLDP09622 509 aaKnown RBP13.97□□□□□ -0.17
SNF8-206ENST00000509989 CCDC172P0C7W6 258 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 TCF4P15884 667 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 POLR2EP19388 210 aaKnown RBP13.97□□□□□ -0.17
SNF8-206ENST00000509989 ADKP55263 362 aaKnown RBP13.97□□□□□ -0.17
SNF8-206ENST00000509989 EIF4HQ15056 248 aaKnown RBP13.97□□□□□ -0.17
SNF8-206ENST00000509989 CA9Q16790 459 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 MANEALQ5VSG8 457 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 RNF219Q5W0B1 726 aaPredicted RBP13.97□□□□□ -0.17
SNF8-206ENST00000509989 KIAA1324Q6UXG2 1013 aaKnown RBP13.97□□□□□ -0.17
SNF8-206ENST00000509989 SND1Q7KZF4 910 aaKnown RBP eCLIP13.97□□□□□ -0.17
SNF8-206ENST00000509989 ARMCX6Q7L4S7 300 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 TRMT11Q7Z4G4 463 aaKnown RBP13.97□□□□□ -0.17
SNF8-206ENST00000509989 TMEFF1Q8IYR6 380 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 UCMAQ8WVF2 138 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 ZNF653Q96CK0 615 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 BTBD6Q96KE9 485 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.97□□□□□ -0.17
SNF8-206ENST00000509989 IRX2Q9BZI1 471 aaPredicted RBP13.97□□□□□ -0.17
SNF8-206ENST00000509989 ISCUQ9H1K1 167 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 ARRDC1-AS1Q9H2J1 176 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 PRSS16Q9NQE7 514 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 KIAA1522Q9P206 1035 aaPredicted RBP13.97□□□□□ -0.17
SNF8-206ENST00000509989 NCDNQ9UBB6 729 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 CNOT8Q9UFF9 292 aaKnown RBP13.97□□□□□ -0.17
SNF8-206ENST00000509989 CYP8B1Q9UNU6 501 aa13.97□□□□□ -0.17
SNF8-206ENST00000509989 LUC7L2Q9Y383 392 aaKnown RBP13.97□□□□□ -0.17
SNF8-206ENST00000509989 CEP250Q9BV73 2442 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms