RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 DDX3XO00571 662 aaKnown RBP eCLIP9.66□□□□□ -0.865e-16■■□□□ 13.2
NEK1-203ENST00000507142 MAGEC1O60732 1142 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 ELFN1P0C7U0 828 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 ITGB6P18564 788 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 MAT2AP31153 395 aaKnown RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 USP39Q53GS9 565 aaKnown RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 ANO7Q6IWH7 933 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 PMF1Q6P1K2 205 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 TMEM159Q96B96 161 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 FRMD8P1Q9BZ68 369 aaPredicted RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 AVENQ9NQS1 362 aaPredicted RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 ZNF212Q9UDV6 495 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 RNF40O75150 1001 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 H2AFYO75367 372 aaKnown RBP9.65□□□□□ -0.86
NEK1-203ENST00000507142 CARSP49589 748 aaKnown RBP9.65□□□□□ -0.86
NEK1-203ENST00000507142 TPD52P55327 224 aaPredicted RBP9.65□□□□□ -0.86
NEK1-203ENST00000507142 FBXW4P57775 412 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 MAMLD1Q13495 774 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 PTK2BQ14289 1009 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 TPRG1Q6ZUI0 275 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 ANKRD33Q7Z3H0 272 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 WFIKKN2Q8TEU8 576 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 STAMBPL1Q96FJ0 436 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 SLC13A1Q9BZW2 595 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 CCSER2Q9H7U1 834 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 RAD18Q9NS91 495 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 ARHGAP20Q9P2F6 1191 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 SLC13A4Q9UKG4 626 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.65□□□□□ -0.86
NEK1-203ENST00000507142 TRIM43BA6NCK2 446 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 SUPT3HB4E1H0 165 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 DYNC1I1O14576 645 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 SUPT3HO75486 399 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 GLP2RO95838 553 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 UGT2B4P06133 528 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 KELP23276 732 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 NOMO3P69849 1222 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 IL9RQ01113 521 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 POU6F1Q14863 301 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 RTP2Q5QGT7 225 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 GKAP1Q5VSY0 366 aaPredicted RBP9.65□□□□□ -0.86
NEK1-203ENST00000507142 RFX8Q6ZV50 586 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 MAFAQ8NHW3 353 aaPredicted RBP9.65□□□□□ -0.86
NEK1-203ENST00000507142 HTR3CQ8WXA8 447 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 TRIM43Q96BQ3 446 aaPredicted RBP9.65□□□□□ -0.86
NEK1-203ENST00000507142 CXorf40BQ96DE9 158 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 TNKS2Q9H2K2 1166 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 CASS4Q9NQ75 786 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 NSMCE4AQ9NXX6 385 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 HCN4Q9Y3Q4 1203 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 NEU2Q9Y3R4 380 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 VPS26AO75436 327 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 TPH1P17752 444 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 CD86P42081 329 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 BOP1Q14137 746 aaKnown RBP9.65□□□□□ -0.86
NEK1-203ENST00000507142 LINGO4Q6UY18 593 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 CD101Q93033 1021 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 SIPA1Q96FS4 1042 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 ZBTB18Q99592 522 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 TRAIPQ9BWF2 469 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 LHX5Q9H2C1 402 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 LRRC40Q9H9A6 602 aa9.65□□□□□ -0.86
NEK1-203ENST00000507142 XAB2Q9HCS7 855 aaKnown RBP9.65□□□□□ -0.86
NEK1-203ENST00000507142 A0A1B0GVM2 712 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 ESYT3A0FGR9 886 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 TCAF2A6NFQ2 919 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 PTPN3P26045 913 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 NR2C2P49116 596 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 MOGSQ13724 837 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 SPARCL1Q14515 664 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 GLE1Q53GS7 698 aaKnown RBP9.65□□□□□ -0.87
NEK1-203ENST00000507142 ACTL9Q8TC94 416 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 TRIM51Q9BSJ1 452 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 SOHLH2Q9NX45 425 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 TRHDEQ9UKU6 1024 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 RPS6KL1Q9Y6S9 549 aa9.65□□□□□ -0.87
NEK1-203ENST00000507142 EIF4E1BA6NMX2 242 aaKnown RBP9.64□□□□□ -0.87
NEK1-203ENST00000507142 MEIS3P2A8K0S8 358 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 HEPACAM2A8MVW5 462 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 HAS3O00219 553 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 ZNF185O15231 689 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 RARAP10276 462 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 CTPS1P17812 591 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 HSPA9P38646 679 aaKnown RBP9.64□□□□□ -0.87
NEK1-203ENST00000507142 ABL2P42684 1182 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 EIF2B5Q13144 721 aaKnown RBP9.64□□□□□ -0.87
NEK1-203ENST00000507142 HIST2H2ACQ16777 129 aaPredicted RBP9.64□□□□□ -0.87
NEK1-203ENST00000507142 PHKG1Q16816 387 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 ANKRD20A8PQ5CZ79 823 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 HIST2H2AA3Q6FI13 130 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 TAC4Q86UU9 113 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 CIR1Q86X95 450 aaPredicted RBP9.64□□□□□ -0.87
NEK1-203ENST00000507142 DEFB119Q8N690 84 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 WHAMMQ8TF30 809 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 TTC17Q96AE7 1141 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 RPL10LQ96L21 214 aaKnown RBP9.64□□□□□ -0.87
NEK1-203ENST00000507142 RMDN2Q96LZ7 410 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 KREMEN1Q96MU8 473 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 TMEM121Q9BTD3 319 aa9.64□□□□□ -0.87
NEK1-203ENST00000507142 TMPRSS4Q9NRS4 437 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms