RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 SYT12Q8IV01 421 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 DEFB119Q8N690 84 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 TCEAL3Q969E4 200 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 CFAP57Q96MR6 1250 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 PPP1R9BQ96SB3 815 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 AGPAT1Q99943 283 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 FUCA2Q9BTY2 467 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 ITM2CQ9NQX7 267 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 ARHGEF38Q9NXL2 777 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 ADAM22Q9P0K1 906 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 TMEM59LQ9UK28 342 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 INTS6Q9UL03 887 aaKnown RBP16.07■□□□□ 0.16
CLDND1-211ENST00000506575 DNAH14Q0VDD8 3507 aa16.07■□□□□ 0.16
CLDND1-211ENST00000506575 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.06■□□□□ 0.16
CLDND1-211ENST00000506575 CALB1P05937 261 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 SRPRAP08240 638 aaKnown RBP16.06■□□□□ 0.16
CLDND1-211ENST00000506575 UNGP13051 313 aaPredicted RBP16.06■□□□□ 0.16
CLDND1-211ENST00000506575 OXTRP30559 389 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 RDXP35241 583 aaKnown RBP16.06■□□□□ 0.16
CLDND1-211ENST00000506575 GGCXP38435 758 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 NNMTP40261 264 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 ATXN1P54253 815 aaKnown RBP16.06■□□□□ 0.16
CLDND1-211ENST00000506575 ECT2LQ008S8 904 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 CENPCQ03188 943 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 ZNF33AQ06730 810 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 ZNF177Q13360 481 aaPredicted RBP16.06■□□□□ 0.16
CLDND1-211ENST00000506575 CLEC16AQ2KHT3 1053 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 LRRC31Q6UY01 552 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 PHLDB2Q86SQ0 1253 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 EMC1Q8N766 993 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 KDM1BQ8NB78 822 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 FOXJ1Q92949 421 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 IGSF8Q969P0 613 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 PCDHB18PQ96TA0 734 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 ADAM33Q9BZ11 813 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 CD93Q9NPY3 652 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 PRSS16Q9NQE7 514 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 USP36Q9P275 1121 aaKnown RBP16.06■□□□□ 0.16
CLDND1-211ENST00000506575 MYO6Q9UM54 1294 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 ERVW-1Q9UQF0 538 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 PI4KAP42356 2102 aa16.06■□□□□ 0.16
CLDND1-211ENST00000506575 ATXN2Q99700 1313 aaKnown RBP16.05■□□□□ 0.16
CLDND1-211ENST00000506575 LAMA1P25391 3075 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 A0A1W2PQC6 194 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 SLC30A4O14863 429 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 RNASEH1O60930 286 aaKnown RBP16.05■□□□□ 0.16
CLDND1-211ENST00000506575 CLDN11O75508 207 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 PDGFRAP16234 1089 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 ITPKAP23677 461 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 SDC4P31431 198 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 CTSOP43234 321 aaPredicted RBP16.05■□□□□ 0.16
CLDND1-211ENST00000506575 TPMTP51580 245 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 CDH4P55283 916 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 ATP11AP98196 1134 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 FOXK2Q01167 660 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 SULT2A1Q06520 285 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 SKOR2Q2VWA4 1001 aaPredicted RBP16.05■□□□□ 0.16
CLDND1-211ENST00000506575 SYCP2LQ5T4T6 812 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 IL31Q6EBC2 164 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 APCDD1Q8J025 514 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 TOE1Q96GM8 510 aaKnown RBP16.05■□□□□ 0.16
CLDND1-211ENST00000506575 HSPA12BQ96MM6 686 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 EDEM2Q9BV94 578 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 SELENOOQ9BVL4 669 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 NUSAP1Q9BXS6 441 aaKnown RBP16.05■□□□□ 0.16
CLDND1-211ENST00000506575 CBX8Q9HC52 389 aa16.05■□□□□ 0.16
CLDND1-211ENST00000506575 WSB2Q9NYS7 404 aaPredicted RBP16.05■□□□□ 0.16
CLDND1-211ENST00000506575 A0A1B0GTH6 734 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 GOLGA6L19H0YKK7 550 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 DNTTP04053 509 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 KRT3P12035 628 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 HOXD12P35452 270 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 LIMK1P53667 647 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 ZBTB16Q05516 673 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 CDO1Q16878 200 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 HNRNPA1L2Q32P51 320 aaKnown RBP16.04■□□□□ 0.16
CLDND1-211ENST00000506575 TTC31Q49AM3 519 aaPredicted RBP16.04■□□□□ 0.16
CLDND1-211ENST00000506575 TRIM61Q5EBN2 209 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 STPG1Q5TH74 334 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 ZNF776Q68DI1 518 aaPredicted RBP16.04■□□□□ 0.16
CLDND1-211ENST00000506575 CXorf57Q6NSI4 855 aaKnown RBP16.04■□□□□ 0.16
CLDND1-211ENST00000506575 TRNP1Q6NT89 227 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 LRSAM1Q6UWE0 723 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 RABEPKQ7Z6M1 372 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 C14orf80Q86SX3 495 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 FAM124AQ86V42 546 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 FAM131BQ86XD5 332 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 PHF13Q86YI8 300 aaPredicted RBP16.04■□□□□ 0.16
CLDND1-211ENST00000506575 RGL4Q8IZJ4 473 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 CEP76Q8TAP6 659 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 RXFP2Q8WXD0 754 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 MYO19Q96H55 970 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 RPL10LQ96L21 214 aaKnown RBP16.04■□□□□ 0.16
CLDND1-211ENST00000506575 MRGPRX3Q96LB0 322 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 C1orf74Q96LT6 269 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 NAP1L5Q96NT1 182 aaPredicted RBP16.04■□□□□ 0.16
CLDND1-211ENST00000506575 NUP58Q9BVL2 599 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 GPR174Q9BXC1 333 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 RXFP3Q9NSD7 469 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 EVLQ9UI08 416 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms