RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 A0A1B0GTH6 734 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 E9PAM4 449 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 RRP8O43159 456 aaKnown RBP9.44□□□□□ -0.9
DHFR-202ENST00000504396 PCDHGA12O60330 932 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 MYL1P05976 194 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 ITGAVP06756 1048 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 KRT13P13646 458 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 ITPKBP27987 946 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 HLA-FP30511 346 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 ME1P48163 572 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 GCLMP48507 274 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 VAMP7P51809 220 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 CAMK2GQ13555 558 aaPredicted RBP9.44□□□□□ -0.9
DHFR-202ENST00000504396 ZNF776Q68DI1 518 aaPredicted RBP9.44□□□□□ -0.9
DHFR-202ENST00000504396 FMNL3Q8IVF7 1028 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 AHI1Q8N157 1196 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 C1orf216Q8TAB5 229 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 WFIKKN2Q8TEU8 576 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 RNF139Q8WU17 664 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 SKA1Q96BD8 255 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 CNDP2Q96KP4 475 aaKnown RBP9.44□□□□□ -0.9
DHFR-202ENST00000504396 SLC6A18Q96N87 628 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 UBXN6Q9BZV1 441 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 NUCKS1Q9H1E3 243 aaKnown RBP9.44□□□□□ -0.9
DHFR-202ENST00000504396 APOBEC3GQ9HC16 384 aaKnown RBP9.44□□□□□ -0.9
DHFR-202ENST00000504396 AASDHPPTQ9NRN7 309 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 PLXNA2O75051 1894 aa9.44□□□□□ -0.9
DHFR-202ENST00000504396 LAMA5O15230 3695 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 CELSR3Q9NYQ7 3312 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 CBX4O00257 560 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 ENC1O14682 589 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 CALUO43852 315 aaPredicted RBP9.43□□□□□ -0.9
DHFR-202ENST00000504396 DFNA5O60443 496 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 RFPL3O75679 317 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 LDOC1O95751 146 aaPredicted RBP9.43□□□□□ -0.9
DHFR-202ENST00000504396 APC2O95996 2303 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 ATP5BP06576 529 aaKnown RBP9.43□□□□□ -0.9
DHFR-202ENST00000504396 PABPC1P11940 636 aaKnown RBP9.43□□□□□ -0.9
DHFR-202ENST00000504396 POLR2EP19388 210 aaKnown RBP9.43□□□□□ -0.9
DHFR-202ENST00000504396 HOXD9P28356 352 aaPredicted RBP9.43□□□□□ -0.9
DHFR-202ENST00000504396 TKTL1P51854 596 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 ST8SIA6P61647 398 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 RPS14P62263 151 aaKnown RBP9.43□□□□□ -0.9
DHFR-202ENST00000504396 ZBTB16Q05516 673 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 STK4Q13043 487 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 DNAJC3Q13217 504 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 KCNT1Q5JUK3 1230 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 PRAMEF14Q5SWL7 426 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 MBLAC2Q68D91 279 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 KIAA0895LQ68EN5 471 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 FOXR1Q6PIV2 292 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 INTS8Q75QN2 995 aaKnown RBP9.43□□□□□ -0.9
DHFR-202ENST00000504396 PIGZQ86VD9 579 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 TMPRSS12Q86WS5 348 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 FAM217AQ8IXS0 508 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 KIAA0895Q8NCT3 520 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 TAS1R2Q8TE23 839 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 GOLGA1Q92805 767 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 COL26A1Q96A83 441 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 TMA16Q96EY4 203 aaKnown RBP9.43□□□□□ -0.9
DHFR-202ENST00000504396 FCRL3Q96P31 734 aaPredicted RBP9.43□□□□□ -0.9
DHFR-202ENST00000504396 KCTD10Q9H3F6 313 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 SGK2Q9HBY8 427 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 OLA1Q9NTK5 396 aaKnown RBP9.43□□□□□ -0.9
DHFR-202ENST00000504396 SFMBT1Q9UHJ3 866 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 GGA2Q9UJY4 613 aa9.43□□□□□ -0.9
DHFR-202ENST00000504396 CABIN1Q9Y6J0 2220 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 MSI1O43347 362 aaKnown RBP9.42□□□□□ -0.9
DHFR-202ENST00000504396 ATP9BO43861 1147 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 RNASEH1O60930 286 aaKnown RBP9.42□□□□□ -0.9
DHFR-202ENST00000504396 LATS1O95835 1130 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 THBS1P07996 1170 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 NR2F2P24468 414 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 CTSKP43235 329 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 NUMA1Q14980 2115 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 NFIL3Q16649 462 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 GOLGA7BQ2TAP0 167 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 HES3Q5TGS1 186 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 SIX6OS1Q8N1H7 587 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 EID2Q8N6I1 236 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 ZNF557Q8N988 423 aaPredicted RBP9.42□□□□□ -0.9
DHFR-202ENST00000504396 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
DHFR-202ENST00000504396 RBBP8NLQ8NC74 664 aaPredicted RBP9.42□□□□□ -0.9
DHFR-202ENST00000504396 UBE2Q2Q8WVN8 375 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 NDRG1Q92597 394 aaKnown RBP9.42□□□□□ -0.9
DHFR-202ENST00000504396 EDEM1Q92611 657 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 ULBP1Q9BZM6 244 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 TMEM245Q9H330 911 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 MTG2Q9H4K7 406 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 RUBCNLQ9H714 662 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 LRRC4Q9HBW1 653 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 PRSS16Q9NQE7 514 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 FBXL12Q9NXK8 326 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 STIM2Q9P246 746 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 SUN2Q9UH99 717 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 TRAF3IP3Q9Y228 551 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 CEP83Q9Y592 693 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 SHROOM3Q8TF72 1996 aa9.42□□□□□ -0.9
DHFR-202ENST00000504396 COL5A1P20908 1838 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms