RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 GOT1P17174 413 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 GPD2P43304 727 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 SGSHP51688 502 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 COL9A2Q14055 689 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 ELAVL3Q14576 367 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 C9orf64Q5T6V5 341 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 NADSYN1Q6IA69 706 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 SND1Q7KZF4 910 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 ENOSF1Q7L5Y1 443 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 OXR1Q8N573 874 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 EHBP1Q8NDI1 1231 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 FAM149B1Q96BN6 582 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 MRGPRX3Q96LB0 322 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 ELF4Q99607 663 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 ERVMER34-1Q9H9K5 563 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 TMEM51Q9NW97 253 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 FTSJ1Q9UET6 329 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 ERVW-1Q9UQF0 538 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 MUC22E2RYF6 1773 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 GOLGA6L7A0A1B0GV03 622 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 TRIM49BA6NDI0 452 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 RNF225M0QZC1 329 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 FYNP06241 537 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 BRD2P25440 801 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 CD38P28907 300 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 SLC8A1P32418 973 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 ARRB1P49407 418 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 PLK1P53350 603 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 MARSP56192 900 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 RPS24P62847 133 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 OVGP1Q12889 678 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 PITRM1Q5JRX3 1037 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 NCEH1Q6PIU2 408 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 DSG4Q86SJ6 1040 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 TMEM110Q86TL2 294 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 SCUBE3Q8IX30 993 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 CARNMT1Q8N4J0 409 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 PRICKLE1Q96MT3 831 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 ZSWIM1Q9BR11 485 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 SLC4A5Q9BY07 1137 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 MIS12Q9H081 205 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 NEUROG2Q9H2A3 272 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 THAP9Q9H5L6 903 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 POPDC2Q9HBU9 364 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 GDF3Q9NR23 364 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 INTS6Q9UL03 887 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 BTBD3Q9Y2F9 522 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 ADAMTS20P59510 1910 aa17.42■□□□□ 0.38
TRAPPC3-207ENST00000497251 ITPR1Q14643 2758 aa17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 SLC7A4O43246 635 aa17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 FGFR1OPO95684 399 aaKnown RBP17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 GLI1P08151 1106 aa17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 YWHAZP63104 245 aaKnown RBP17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 DCAF6Q58WW2 860 aa17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 TTI2Q6NXR4 508 aa17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 IQCHQ86VS3 1027 aa17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 MMAAQ8IVH4 418 aaKnown RBP17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 ATP6V0D2Q8N8Y2 350 aa17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 NUCKS1Q9H1E3 243 aaKnown RBP17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 ST7Q9NRC1 585 aa17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 CEP83Q9Y592 693 aa17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 SLCO1B1Q9Y6L6 691 aa17.41■□□□□ 0.38
TRAPPC3-207ENST00000497251 A0A1W2PP55 124 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 TRABD2BA6NFA1 517 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 MID1O15344 667 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 RNASEH2AO75792 299 aaKnown RBP17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 ABCB4P21439 1286 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 HNF1BP35680 557 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 RXRGP48443 463 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 SNX16P57768 344 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 ILKQ13418 452 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 CAMK2BQ13554 666 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 FAM46CQ5VWP2 391 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 PDZD3Q86UT5 571 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 TRIM59Q8IWR1 403 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 DHX40Q8IX18 779 aaKnown RBP17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 CLEC4CQ8WTT0 213 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 SPAG5Q96R06 1193 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 FAM129BQ96TA1 746 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 ASNSD1Q9NWL6 643 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 NAALADL1Q9UQQ1 740 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 DMTF1Q9Y222 760 aa17.4■□□□□ 0.38
TRAPPC3-207ENST00000497251 NBEAQ8NFP9 2946 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 A0A087WV48 116 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 A0A1B0GVM2 712 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 TCAF2A6NFQ2 919 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 FAM47DPA6NHR8 397 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 F5H5T6 163 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 LATO43561 262 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 TRUB2O95900 331 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 IGLV3-25P01717 112 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 AFPP02771 609 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 ITGAVP06756 1048 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 TACR2P21452 398 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 CCDC15Q0P6D6 951 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 KCNH2Q12809 1159 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 EIF4EBP2Q13542 120 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 FSCBQ5H9T9 825 aa17.39■□□□□ 0.37
TRAPPC3-207ENST00000497251 RABGAP1LQ5R372 815 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms