RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 CNGB3Q9NQW8 809 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 SLC38A7Q9NVC3 462 aa11.49□□□□□ -0.57
CHMP3-209ENST00000494623 HBS1LQ9Y450 684 aaKnown RBP11.49□□□□□ -0.57
CHMP3-209ENST00000494623 ATP9BO43861 1147 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 GLRA3O75311 464 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 LTFP02788 710 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 TPH1P17752 444 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 SCNN1GP51170 649 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 MRPS6P82932 125 aaKnown RBP11.48□□□□□ -0.57
CHMP3-209ENST00000494623 KDSRQ06136 332 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 TAF1CQ15572 869 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-209ENST00000494623 ARL13BQ3SXY8 428 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 CMC1Q7Z7K0 106 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 RPAINQ86UA6 219 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 TEX9Q8N6V9 391 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 RAB3IL1Q8TBN0 382 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 ACMSDQ8TDX5 336 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 RNF34Q969K3 372 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 AZIN2Q96A70 460 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 MYCBPQ99417 103 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-209ENST00000494623 COLEC11Q9BWP8 271 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 TKTL2Q9H0I9 626 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 CXorf56Q9H5V9 222 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 YY1AP1Q9H869 796 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 ZNF358Q9NW07 568 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 UBP1Q9NZI7 540 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 BFARQ9NZS9 450 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 TMEM216Q9P0N5 145 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 DNAJC16Q9Y2G8 782 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 ZNF638Q14966 1978 aaKnown RBP11.48□□□□□ -0.57
CHMP3-209ENST00000494623 SF3B1O75533 1304 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHMP3-209ENST00000494623 PDCD11Q14690 1871 aaKnown RBP11.48□□□□□ -0.57
CHMP3-209ENST00000494623 ARL5CA6NH57 179 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 PLIN3O60664 434 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 FAM163BP0C2L3 166 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 ABCG1P45844 678 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 SLC1A6P48664 564 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 KPNB1Q14974 876 aaKnown RBP11.48□□□□□ -0.57
CHMP3-209ENST00000494623 NAA25Q14CX7 972 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 GNASQ5JWF2 1037 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 SPANXN3Q5MJ09 141 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 CERCAMQ5T4B2 595 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 MBLAC2Q68D91 279 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 TAF2Q6P1X5 1199 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 C10orf107Q8IVU9 208 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 NTAN1Q96AB6 310 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 CELF6Q96J87 481 aaKnown RBP11.48□□□□□ -0.57
CHMP3-209ENST00000494623 AGAP2Q99490 1192 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 GORASP1Q9BQQ3 440 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 LRRC40Q9H9A6 602 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 OR12D3Q9UGF7 316 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 VANGL2Q9ULK5 521 aa11.48□□□□□ -0.57
CHMP3-209ENST00000494623 AP2A1O95782 977 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 SRGAP2BP0DMP2 458 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 FGF3P11487 239 aaPredicted RBP11.47□□□□□ -0.57
CHMP3-209ENST00000494623 PGM1P36871 562 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 GP5P40197 560 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 GARSP41250 739 aaKnown RBP11.47□□□□□ -0.57
CHMP3-209ENST00000494623 TAF11Q15544 211 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 TIGD5Q53EQ6 642 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 CXCL17Q6UXB2 119 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 STRA8Q7Z7C7 330 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 WDR75Q8IWA0 830 aaKnown RBP11.47□□□□□ -0.57
CHMP3-209ENST00000494623 TMEM86AQ8N2M4 240 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 FBXO27Q8NI29 283 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 TRPV2Q9Y5S1 764 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 CCDC78A2IDD5 438 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 CAPN14A8MX76 684 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 CLGNO14967 610 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 JCHAINP01591 159 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 BDNFP23560 247 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 CDC25CP30307 473 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 CD68P34810 354 aaPredicted RBP11.47□□□□□ -0.57
CHMP3-209ENST00000494623 PSEN1P49768 467 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 SESN3P58005 492 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 PPIDQ08752 370 aaKnown RBP11.47□□□□□ -0.57
CHMP3-209ENST00000494623 ZBTB17Q13105 803 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 SEMA3BQ13214 749 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 UBAP2LQ14157 1087 aaKnown RBP11.47□□□□□ -0.57
CHMP3-209ENST00000494623 HSP90AA5PQ58FG0 334 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 RAB41Q5JT25 222 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 STXBP5Q5T5C0 1151 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 TEDDM1Q5T9Z0 273 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 GRTP1Q5TC63 336 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 DCLK2Q8N568 766 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHMP3-209ENST00000494623 USP33Q8TEY7 942 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 MFSD3Q96ES6 412 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 DCLRE1BQ9H816 532 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 CDH9Q9ULB4 789 aa11.47□□□□□ -0.57
CHMP3-209ENST00000494623 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.47□□□□□ -0.57
CHMP3-209ENST00000494623 PRR5-ARHGAP8B1AHC4 643 aa11.46□□□□□ -0.57
CHMP3-209ENST00000494623 HHLA1C9JL84 531 aa11.46□□□□□ -0.57
CHMP3-209ENST00000494623 POMCP01189 267 aa11.46□□□□□ -0.57
CHMP3-209ENST00000494623 CHRNA1P02708 482 aa11.46□□□□□ -0.57
CHMP3-209ENST00000494623 NFKB1P19838 968 aa11.46□□□□□ -0.57
CHMP3-209ENST00000494623 RGS2P41220 211 aa11.46□□□□□ -0.57
CHMP3-209ENST00000494623 CCNG1P51959 295 aa11.46□□□□□ -0.57
CHMP3-209ENST00000494623 AIF1P55008 147 aa11.46□□□□□ -0.57
CHMP3-209ENST00000494623 ARHGAP8P85298 464 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms