RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 TMEM59LQ9UK28 342 aa7.47□□□□□ -1.21
RBM39-239ENST00000494274 ERVW-1Q9UQF0 538 aa7.47□□□□□ -1.21
RBM39-239ENST00000494274 DAAM1Q9Y4D1 1078 aa7.47□□□□□ -1.21
RBM39-239ENST00000494274 PAXBP1Q9Y5B6 917 aa7.47□□□□□ -1.21
RBM39-239ENST00000494274 FAM186AA6NE01 2351 aa7.47□□□□□ -1.21
RBM39-239ENST00000494274 PTPRDP23468 1912 aa7.46□□□□□ -1.21
RBM39-239ENST00000494274 GVINP1Q7Z2Y8 2422 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 A0A1B0GVM2 712 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 TCAF2A6NFQ2 919 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 MEI4A8MW99 385 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 TMCO5BA8MYB1 307 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 RNASEH1O60930 286 aaKnown RBP7.46□□□□□ -1.22
RBM39-239ENST00000494274 SIN3BO75182 1162 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 CLDN11O75508 207 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 CNTN5O94779 1100 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 SERPINC1P01008 464 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 CCDC172P0C7W6 258 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 KRT3P12035 628 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 TNFAIP3P21580 790 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 MMP8P22894 467 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 OXTRP30559 389 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 SCNN1AP37088 669 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 MAPK8P45983 427 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 CXCR3P49682 368 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 STK19P49842 368 aaPredicted RBP7.46□□□□□ -1.22
RBM39-239ENST00000494274 IRAK1P51617 712 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 ATXN3P54252 364 aaPredicted RBP7.46□□□□□ -1.22
RBM39-239ENST00000494274 TPM4P67936 248 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 FOXK2Q01167 660 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 GFPT1Q06210 699 aaPredicted RBP7.46□□□□□ -1.22
RBM39-239ENST00000494274 MTA1Q13330 715 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 CAMK2GQ13555 558 aaPredicted RBP7.46□□□□□ -1.22
RBM39-239ENST00000494274 SLC12A1Q13621 1099 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 CDO1Q16878 200 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 CLEC16AQ2KHT3 1053 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 KLHL40Q2TBA0 621 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 HNRNPA1L2Q32P51 320 aaKnown RBP7.46□□□□□ -1.22
RBM39-239ENST00000494274 ACCSLQ4AC99 568 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 WDR45BQ5MNZ6 344 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 BRMS1LQ5PSV4 323 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 SYCP2LQ5T4T6 812 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 SH3PXD2AQ5TCZ1 1133 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 OTUD1Q5VV17 481 aaPredicted RBP7.46□□□□□ -1.22
RBM39-239ENST00000494274 LRRC31Q6UY01 552 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 TRIM72Q6ZMU5 477 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 SLC41A1Q8IVJ1 513 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 JOSD2Q8TAC2 188 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 RXFP2Q8WXD0 754 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 SPOCK2Q92563 424 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 NT5C3BQ969T7 300 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 ZNF419Q96HQ0 510 aaPredicted RBP7.46□□□□□ -1.22
RBM39-239ENST00000494274 NAP1L5Q96NT1 182 aaPredicted RBP7.46□□□□□ -1.22
RBM39-239ENST00000494274 PPP1R9BQ96SB3 815 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 AGPAT1Q99943 283 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 BPIFA3Q9BQP9 254 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 NUP58Q9BVL2 599 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 GTPBP2Q9BX10 602 aaKnown RBP7.46□□□□□ -1.22
RBM39-239ENST00000494274 MUC3BQ9H195 1237 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 FSCN3Q9NQT6 498 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 ANLNQ9NQW6 1124 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 MPP6Q9NZW5 540 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 VPS28Q9UK41 221 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 PILRBQ9UKJ0 227 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 SLC6A14Q9UN76 642 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 MIA3Q5JRA6 1907 aa7.46□□□□□ -1.22
RBM39-239ENST00000494274 GREB1Q4ZG55 1949 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 ANAPC1Q9H1A4 1944 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 MED19A0JLT2 244 aaPredicted RBP7.45□□□□□ -1.22
RBM39-239ENST00000494274 LNP1A1A4G5 178 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 ANKRD62A6NC57 917 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 FAM47DPA6NHR8 397 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 METTL12A8MUP2 240 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 I6L893 689 aaPredicted RBP7.45□□□□□ -1.22
RBM39-239ENST00000494274 BNIP3LO60238 219 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 RNASEH2AO75792 299 aaKnown RBP7.45□□□□□ -1.22
RBM39-239ENST00000494274 CALB1P05937 261 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 SRPRAP08240 638 aaKnown RBP7.45□□□□□ -1.22
RBM39-239ENST00000494274 UNGP13051 313 aaPredicted RBP7.45□□□□□ -1.22
RBM39-239ENST00000494274 GNSP15586 552 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 FERP16591 822 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 SDC4P31431 198 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 ACSL1P33121 698 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 RDXP35241 583 aaKnown RBP7.45□□□□□ -1.22
RBM39-239ENST00000494274 RFC1P35251 1148 aaPredicted RBP7.45□□□□□ -1.22
RBM39-239ENST00000494274 DPP6P42658 865 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 CDH4P55283 916 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 OXCT1P55809 520 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 RPS14P62263 151 aaKnown RBP7.45□□□□□ -1.22
RBM39-239ENST00000494274 SULT2A1Q06520 285 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 IQCB1Q15051 598 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 DUOXA1Q1HG43 343 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 C15orf59Q2T9L4 293 aaPredicted RBP7.45□□□□□ -1.22
RBM39-239ENST00000494274 ARL13BQ3SXY8 428 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 CCDC14Q49A88 953 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 RAB6CQ53S08 254 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 ALFQ53S48 1182 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 PPM1JQ5JR12 505 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 TTC39BQ5VTQ0 682 aaPredicted RBP7.45□□□□□ -1.22
RBM39-239ENST00000494274 DCAF12L1Q5VU92 463 aa7.45□□□□□ -1.22
RBM39-239ENST00000494274 DAB2IPQ5VWQ8 1189 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms