RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 MYMKA6NI61 221 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 KIF28PB7ZC32 967 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 PRPF4O43172 522 aaKnown RBP eCLIP4.2□□□□□ -1.74
CD46-217ENST00000493796 TULP3O75386 442 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 TNFRSF6BO95407 300 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 ALDOAP04075 364 aaKnown RBP4.2□□□□□ -1.74
CD46-217ENST00000493796 FGF2P09038 288 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 SETSIPP0DME0 302 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 TNFRSF1BP20333 461 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 TGM2P21980 687 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 HTR3AP46098 478 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 POLGP54098 1239 aaPredicted RBP4.2□□□□□ -1.74
CD46-217ENST00000493796 FOXL2P58012 376 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 TAS2R50P59544 299 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 MAPK7Q13164 816 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 TRIM60Q495X7 471 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 PIM3Q86V86 326 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 ADGRF3Q8IZF5 1079 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 EXD3Q8N9H8 876 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 RSC1A1Q92681 617 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 NAF1Q96HR8 494 aaKnown RBP4.2□□□□□ -1.74
CD46-217ENST00000493796 WDR12Q9GZL7 423 aaKnown RBP4.2□□□□□ -1.74
CD46-217ENST00000493796 CCDC134Q9H6E4 229 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 OBP2BQ9NPH6 170 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 MSRB1Q9NZV6 116 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 RAB21Q9UL25 225 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 LRCH1Q9Y2L9 728 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 ABCA6Q8N139 1617 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 ABCC1P33527 1531 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 EHBP1L1Q8N3D4 1523 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 SYCP2Q9BX26 1530 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 ABCC5O15440 1437 aa4.2□□□□□ -1.74
CD46-217ENST00000493796 CROCC2H7BZ55 1655 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 CCDC18Q5T9S5 1454 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 KIR2DS5A0A0G2JLQ3 304 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 FAM90A18PA6NE21 464 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 FAM90A16PA6NEW6 464 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 C3orf70A6NLC5 250 aaPredicted RBP4.19□□□□□ -1.74
CD46-217ENST00000493796 FAM90A9PA6NNJ1 464 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 LGALS16A8MUM7 142 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 FAM90A5PA8MXJ8 464 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 KIR2DS3K7RE56 304 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 KCNAB3O43448 404 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 WNT1P04628 370 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 CYP3A4P08684 503 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 HMGB1P09429 215 aaKnown RBP4.19□□□□□ -1.74
CD46-217ENST00000493796 FAM90A15PP0C7V4 464 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 FAM90A14PP0C7W9 464 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 PEPDP12955 493 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 GRK5P34947 590 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 FOXG1P55316 489 aaPredicted RBP4.19□□□□□ -1.74
CD46-217ENST00000493796 FAM3BP58499 235 aaPredicted RBP4.19□□□□□ -1.74
CD46-217ENST00000493796 LINC00205P59089 165 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 SHC2P98077 582 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 TNFAIP2Q03169 654 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 HDAC1Q13547 482 aaPredicted RBP4.19□□□□□ -1.74
CD46-217ENST00000493796 KIAA1755Q5JYT7 1200 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 ZNF569Q5MCW4 686 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 PGBD2Q6P3X8 592 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 TMEM88Q6PEY1 159 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 COLCA1Q6ZS62 124 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 PAQR4Q8N4S7 273 aaPredicted RBP4.19□□□□□ -1.74
CD46-217ENST00000493796 ZNF527Q8NB42 609 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 OR1N1Q8NGS0 311 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 EID2BQ96D98 161 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 MSI2Q96DH6 328 aaKnown RBP4.19□□□□□ -1.74
CD46-217ENST00000493796 MECRQ9BV79 373 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 SFXN1Q9H9B4 322 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 THSD1Q9NS62 852 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 TRPC5Q9UL62 973 aaPredicted RBP4.19□□□□□ -1.74
CD46-217ENST00000493796 PCDHA12Q9UN75 941 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 COG5Q9UP83 839 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 SLC12A4Q9UP95 1085 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 CNTN6Q9UQ52 1028 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 AKNAQ7Z591 1439 aa4.19□□□□□ -1.74
CD46-217ENST00000493796 CFAP65Q6ZU64 1925 aaKnown RBP4.19□□□□□ -1.74
CD46-217ENST00000493796 CAMSAP2Q08AD1 1489 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 TCOF1Q13428 1488 aaKnown RBP4.18□□□□□ -1.74
CD46-217ENST00000493796 LMTK3Q96Q04 1460 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 MROH1Q8NDA8 1641 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 TTC3P53804 2025 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 CYP3A7-CYP3A51PA0A087WV96 503 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 IGLV5-39A0A0G2JS06 123 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 ABHD14A-ACY1A0A1B0GW23 586 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 A0A1W2PPC1 479 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 FAM90A10PA6NDY2 464 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 PLEKHD1A6NEE1 506 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 SLC38A8A6NNN8 435 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 H3BNX3 289 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 ATG13O75143 517 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 EPN2O95208 641 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 LARGE1O95461 756 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 TOMM40O96008 361 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 ITGB6P18564 788 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 SCP2P22307 547 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 CYP3A7P24462 503 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 PDIA3P30101 505 aaKnown RBP4.18□□□□□ -1.74
CD46-217ENST00000493796 ALDH7A1P49419 539 aaKnown RBP4.18□□□□□ -1.74
CD46-217ENST00000493796 RBM6P78332 1123 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms