RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 TRIM38O00635 465 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 RRP8O43159 456 aaKnown RBP13.71□□□□□ -0.21
USF1-206ENST00000491629 RHOBTB3O94955 611 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 FYNP06241 537 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 CDK4P11802 303 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 KRT13P13646 458 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 LCP1P13796 627 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 VAV1P15498 845 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 PFKFB1P16118 471 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 CKMT2P17540 419 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 GTF2H1P32780 548 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 PSMC2P35998 433 aaKnown RBP13.71□□□□□ -0.21
USF1-206ENST00000491629 PSMD8P48556 350 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 NUMBP49757 651 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 ADAM9Q13443 819 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 PKP1Q13835 747 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 CBWD6Q4V339 395 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 PITRM1Q5JRX3 1037 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 CBWD3Q5JTY5 395 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 CBWD5Q5RIA9 395 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 PMF1Q6P1K2 205 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 GPR155Q7Z3F1 870 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 APCDD1Q8J025 514 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 CACTIN-AS1Q8N1I8 211 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 CFAP52Q8N1V2 620 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 STK40Q8N2I9 435 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 DCBLD1Q8N8Z6 715 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 KDM1BQ8NB78 822 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 TFAP2BQ92481 460 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 FAM131CQ96AQ9 280 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 SERAC1Q96JX3 654 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 FCRL2Q96LA5 508 aaPredicted RBP13.71□□□□□ -0.21
USF1-206ENST00000491629 OMDQ99983 421 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 SEMA4CQ9C0C4 833 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 NUCKS1Q9H1E3 243 aaKnown RBP13.71□□□□□ -0.21
USF1-206ENST00000491629 ERVMER34-1Q9H9K5 563 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 LRRC4Q9HBW1 653 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 RCOR1Q9UKL0 485 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 HPSEQ9Y251 543 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 PCDHB1Q9Y5F3 818 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 BSNQ9UPA5 3926 aa13.71□□□□□ -0.21
USF1-206ENST00000491629 COL12A1Q99715 3063 aa13.71□□□□□ -0.22
USF1-206ENST00000491629 TEX51A0A1B0GUA7 166 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 K7ELQ4 463 aaPredicted RBP13.7□□□□□ -0.22
USF1-206ENST00000491629 YKT6O15498 198 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 IRAK2O43187 625 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 F13A1P00488 732 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 CALCAP01258 141 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 GOT1P17174 413 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 GLDCP23378 1020 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 ACP1P24666 158 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 RGS7P49802 495 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 STK19P49842 368 aaPredicted RBP13.7□□□□□ -0.22
USF1-206ENST00000491629 MXI1P50539 228 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 CXADRP78310 365 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 CFHR1Q03591 330 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 TBC1D25Q3MII6 688 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 SGO2Q562F6 1265 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 SND1Q7KZF4 910 aaKnown RBP eCLIP13.7□□□□□ -0.22
USF1-206ENST00000491629 SLC25A45Q8N413 288 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 CARNMT1Q8N4J0 409 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 TTC39CQ8N584 583 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 HJURPQ8NCD3 748 aaPredicted RBP13.7□□□□□ -0.22
USF1-206ENST00000491629 CCDC150Q8NCX0 1101 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 OR14C36Q8NHC7 312 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 AZIN2Q96A70 460 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 RPL10LQ96L21 214 aaKnown RBP13.7□□□□□ -0.22
USF1-206ENST00000491629 IPO9Q96P70 1041 aaKnown RBP13.7□□□□□ -0.22
USF1-206ENST00000491629 IRX2Q9BZI1 471 aaPredicted RBP13.7□□□□□ -0.22
USF1-206ENST00000491629 CNGB3Q9NQW8 809 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 XPO7Q9UIA9 1087 aaKnown RBP13.7□□□□□ -0.22
USF1-206ENST00000491629 CA5BQ9Y2D0 317 aa13.7□□□□□ -0.22
USF1-206ENST00000491629 EDDM13A0A1B0GTR0 161 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 TARSL2A2RTX5 802 aaKnown RBP13.69□□□□□ -0.22
USF1-206ENST00000491629 RNASEH1O60930 286 aaKnown RBP13.69□□□□□ -0.22
USF1-206ENST00000491629 SDC3O75056 442 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 ASLP04424 464 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 ZSCAN22P10073 491 aaPredicted RBP13.69□□□□□ -0.22
USF1-206ENST00000491629 MZF1P28698 734 aaPredicted RBP13.69□□□□□ -0.22
USF1-206ENST00000491629 ARRB1P49407 418 aaPredicted RBP13.69□□□□□ -0.22
USF1-206ENST00000491629 TBX4P57082 545 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 SLC8A3P57103 927 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 ST8SIA6P61647 398 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 DNM1Q05193 864 aaKnown RBP13.69□□□□□ -0.22
USF1-206ENST00000491629 DPYDQ12882 1025 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 ILKQ13418 452 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 CUL2Q13617 745 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 MS4A13Q5J8X5 152 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 NUGGCQ68CJ6 796 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 NAPEPLDQ6IQ20 393 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 UNC45BQ8IWX7 931 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 SIX6OS1Q8N1H7 587 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 GUF1Q8N442 669 aaKnown RBP13.69□□□□□ -0.22
USF1-206ENST00000491629 SLC35F5Q8WV83 523 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 BAP1Q92560 729 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 SKA1Q96BD8 255 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 SLC39A13Q96H72 371 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 DNAI2Q9GZS0 605 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 SARDHQ9UL12 918 aa13.69□□□□□ -0.22
USF1-206ENST00000491629 CLCA2Q9UQC9 943 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms