RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 CACUL1Q86Y37 369 aa11.73□□□□□ -0.53
CDCP1-203ENST00000490471 GALNT15Q8N3T1 639 aa11.73□□□□□ -0.53
CDCP1-203ENST00000490471 PTCD2Q8WV60 388 aaKnown RBP11.73□□□□□ -0.53
CDCP1-203ENST00000490471 SLC39A13Q96H72 371 aa11.73□□□□□ -0.53
CDCP1-203ENST00000490471 PPP1R13BQ96KQ4 1090 aa11.73□□□□□ -0.53
CDCP1-203ENST00000490471 FCRL2Q96LA5 508 aaPredicted RBP11.73□□□□□ -0.53
CDCP1-203ENST00000490471 RSPH9Q9H1X1 276 aaPredicted RBP11.73□□□□□ -0.53
CDCP1-203ENST00000490471 PABPC3Q9H361 631 aaKnown RBP11.73□□□□□ -0.53
CDCP1-203ENST00000490471 STAP1Q9ULZ2 295 aa11.73□□□□□ -0.53
CDCP1-203ENST00000490471 ERVW-1Q9UQF0 538 aa11.73□□□□□ -0.53
CDCP1-203ENST00000490471 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.73□□□□□ -0.53
CDCP1-203ENST00000490471 A0A1B0GVM2 712 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 TCAF2A6NFQ2 919 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 E5RJQ4 531 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 C1QTNF3-AMACRE9PGA6 284 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 KRT37O76014 449 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 ZNF18P17022 549 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 SLC6A4P31645 630 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 GRK6P43250 576 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 CCT8P50990 548 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 RACK1P63244 317 aaKnown RBP11.72□□□□□ -0.53
CDCP1-203ENST00000490471 KRT83P78385 493 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 CST6Q15828 149 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 PTPRNQ16849 979 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 FAM133BQ5BKY9 247 aaKnown RBP11.72□□□□□ -0.53
CDCP1-203ENST00000490471 CT47A1Q5JQC4 288 aaPredicted RBP11.72□□□□□ -0.53
CDCP1-203ENST00000490471 PITRM1Q5JRX3 1037 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 OR6B2Q6IFH4 312 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 TRIM65Q6PJ69 517 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 LRRC31Q6UY01 552 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 PRPF39Q86UA1 669 aaKnown RBP11.72□□□□□ -0.53
CDCP1-203ENST00000490471 OXR1Q8N573 874 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 C1orf131Q8NDD1 294 aaKnown RBP11.72□□□□□ -0.53
CDCP1-203ENST00000490471 OR2T34Q8NGX1 318 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 ADAMTS14Q8WXS8 1223 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 KAT5Q92993 513 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 IGSF8Q969P0 613 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 KREMEN1Q96MU8 473 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 KDM4CQ9H3R0 1056 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 DDIT4Q9NX09 232 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 ZMIZ1Q9ULJ6 1067 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 PCDHGC3Q9UN70 934 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 ANKRD6Q9Y2G4 727 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 ADAMTS9Q9P2N4 1935 aa11.72□□□□□ -0.53
CDCP1-203ENST00000490471 CKAP5Q14008 2032 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 ITIH6Q6UXX5 1313 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 FAM221BA6H8Z2 402 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 FAM47DPA6NHR8 397 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 C1QTNF9BB2RNN3 333 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 PES1O00541 588 aaKnown RBP11.71□□□□□ -0.53
CDCP1-203ENST00000490471 SLC7A4O43246 635 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 HYAL3O43820 417 aaPredicted RBP11.71□□□□□ -0.53
CDCP1-203ENST00000490471 GJB3O75712 270 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 RNASEH2AO75792 299 aaKnown RBP11.71□□□□□ -0.53
CDCP1-203ENST00000490471 FTH1P19P0C7X4 201 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 C1QTNF9P0C862 333 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 GOT1P17174 413 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 SLC8A1P32418 973 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 ACSL1P33121 698 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 NOS2P35228 1153 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 ARRB1P49407 418 aaPredicted RBP11.71□□□□□ -0.53
CDCP1-203ENST00000490471 CCR5P51681 352 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 RPS24P62847 133 aaKnown RBP11.71□□□□□ -0.53
CDCP1-203ENST00000490471 PDCLQ13371 301 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 ELAVL3Q14576 367 aaKnown RBP11.71□□□□□ -0.53
CDCP1-203ENST00000490471 MAN2A1Q16706 1144 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 ACCSLQ4AC99 568 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 HS1BP3Q53T59 392 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 ZC3H12AQ5D1E8 599 aaKnown RBP11.71□□□□□ -0.53
CDCP1-203ENST00000490471 RAP1GAP2Q684P5 730 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 DENND1BQ6P3S1 775 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 TAC4Q86UU9 113 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 DHX40Q8IX18 779 aaKnown RBP11.71□□□□□ -0.53
CDCP1-203ENST00000490471 PLPP6Q8IY26 295 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 CFAP52Q8N1V2 620 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 TMEM35BQ8NCS4 154 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 CLEC4CQ8WTT0 213 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 ZCCHC14Q8WYQ9 949 aaKnown RBP11.71□□□□□ -0.53
CDCP1-203ENST00000490471 OR8D1Q8WZ84 308 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 BIRC7Q96CA5 298 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 RPRD1AQ96P16 312 aaPredicted RBP11.71□□□□□ -0.53
CDCP1-203ENST00000490471 CRACR2AQ9BSW2 395 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 C6orf106Q9H6K1 298 aaPredicted RBP11.71□□□□□ -0.53
CDCP1-203ENST00000490471 FSCN3Q9NQT6 498 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 AASDHPPTQ9NRN7 309 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 CHMP5Q9NZZ3 219 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 PCOLCE2Q9UKZ9 415 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 LHX6Q9UPM6 363 aa11.71□□□□□ -0.53
CDCP1-203ENST00000490471 A0A1B0GVT2 93 aa11.7□□□□□ -0.54
CDCP1-203ENST00000490471 A0A1W2PPC4 97 aa11.7□□□□□ -0.54
CDCP1-203ENST00000490471 VILLO15195 856 aa11.7□□□□□ -0.54
CDCP1-203ENST00000490471 PAPSS1O43252 624 aaPredicted RBP11.7□□□□□ -0.54
CDCP1-203ENST00000490471 TNFSF14O43557 240 aa11.7□□□□□ -0.54
CDCP1-203ENST00000490471 PCDHGA12O60330 932 aa11.7□□□□□ -0.54
CDCP1-203ENST00000490471 SIN3BO75182 1162 aa11.7□□□□□ -0.54
CDCP1-203ENST00000490471 CLDN11O75508 207 aa11.7□□□□□ -0.54
CDCP1-203ENST00000490471 IL1BP01584 269 aa11.7□□□□□ -0.54
CDCP1-203ENST00000490471 ERCC5P28715 1186 aaPredicted RBP11.7□□□□□ -0.54
CDCP1-203ENST00000490471 CSNK1EP49674 416 aaKnown RBP11.7□□□□□ -0.54
CDCP1-203ENST00000490471 PLK1P53350 603 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms