RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 FCRL2Q96LA5 508 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-228ENST00000487354 ZSWIM1Q9BR11 485 aa15.92■□□□□ 0.14
MCF2L-228ENST00000487354 CAAP1Q9H8G2 361 aa15.92■□□□□ 0.14
MCF2L-228ENST00000487354 LRRC4Q9HBW1 653 aa15.92■□□□□ 0.14
MCF2L-228ENST00000487354 CNGB3Q9NQW8 809 aa15.92■□□□□ 0.14
MCF2L-228ENST00000487354 RAB20Q9NX57 234 aa15.92■□□□□ 0.14
MCF2L-228ENST00000487354 STIM2Q9P246 746 aa15.92■□□□□ 0.14
MCF2L-228ENST00000487354 SLCO3A1Q9UIG8 710 aa15.92■□□□□ 0.14
MCF2L-228ENST00000487354 MAPK8IP1Q9UQF2 711 aa15.92■□□□□ 0.14
MCF2L-228ENST00000487354 HPSEQ9Y251 543 aa15.92■□□□□ 0.14
MCF2L-228ENST00000487354 TRIM38O00635 465 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 IRAK2O43187 625 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 RHOBTB3O94955 611 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 ASLP04424 464 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 FYNP06241 537 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 KRT13P13646 458 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 PFKFB1P16118 471 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 GOT1P17174 413 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 CKMT2P17540 419 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 GLDCP23378 1020 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 PSMC2P35998 433 aaKnown RBP15.91■□□□□ 0.14
MCF2L-228ENST00000487354 ARRB1P49407 418 aaPredicted RBP15.91■□□□□ 0.14
MCF2L-228ENST00000487354 CXADRP78310 365 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 CFHR1Q03591 330 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 CBWD6Q4V339 395 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 CBWD3Q5JTY5 395 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 CBWD5Q5RIA9 395 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 NAPEPLDQ6IQ20 393 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 STK40Q8N2I9 435 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 HJURPQ8NCD3 748 aaPredicted RBP15.91■□□□□ 0.14
MCF2L-228ENST00000487354 CCDC150Q8NCX0 1101 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 TFAP2BQ92481 460 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 PTPRN2Q92932 1015 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 AZIN2Q96A70 460 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 IPO9Q96P70 1041 aaKnown RBP15.91■□□□□ 0.14
MCF2L-228ENST00000487354 SEMA4CQ9C0C4 833 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 NUCKS1Q9H1E3 243 aaKnown RBP15.91■□□□□ 0.14
MCF2L-228ENST00000487354 CLCA2Q9UQC9 943 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 PCDHB1Q9Y5F3 818 aa15.91■□□□□ 0.14
MCF2L-228ENST00000487354 EDDM13A0A1B0GTR0 161 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 TARSL2A2RTX5 802 aaKnown RBP15.9■□□□□ 0.14
MCF2L-228ENST00000487354 K7ELQ4 463 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-228ENST00000487354 F13A1P00488 732 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 VAV1P15498 845 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 MZF1P28698 734 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-228ENST00000487354 STK19P49842 368 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-228ENST00000487354 SLC8A3P57103 927 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 SGO2Q562F6 1265 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 NUGGCQ68CJ6 796 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 PMF1Q6P1K2 205 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 SND1Q7KZF4 910 aaKnown RBP eCLIP15.9■□□□□ 0.14
MCF2L-228ENST00000487354 APCDD1Q8J025 514 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 SIX6OS1Q8N1H7 587 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 MFSD2AQ8NA29 543 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 OR14C36Q8NHC7 312 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 SLC35F5Q8WV83 523 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 SKA1Q96BD8 255 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 HIC2Q96JB3 615 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 OMDQ99983 421 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 DNAI2Q9GZS0 605 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 XPO7Q9UIA9 1087 aaKnown RBP15.9■□□□□ 0.14
MCF2L-228ENST00000487354 HECTD1Q9ULT8 2610 aa15.9■□□□□ 0.14
MCF2L-228ENST00000487354 A0A1B0GVL5 298 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 ERVH48-1M5A8F1 160 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 PIK3R2O00459 728 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 SIGLEC6O43699 453 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 RNASEH1O60930 286 aaKnown RBP15.89■□□□□ 0.13
MCF2L-228ENST00000487354 SDC3O75056 442 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 LUC7L3O95232 432 aaKnown RBP15.89■□□□□ 0.13
MCF2L-228ENST00000487354 SRPRAP08240 638 aaKnown RBP15.89■□□□□ 0.13
MCF2L-228ENST00000487354 GIMD1P0DJR0 217 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 SETSIPP0DME0 302 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 LCP1P13796 627 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 C5AR1P21730 350 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 ACTN2P35609 894 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 SLC11A2P49281 568 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 RGS7P49802 495 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 TBX4P57082 545 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 ST8SIA6P61647 398 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 DPYDQ12882 1025 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 ADAM9Q13443 819 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 CUL2Q13617 745 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 PKP1Q13835 747 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 MS4A13Q5J8X5 152 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 CDCP2Q5VXM1 449 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 CFAP52Q8N1V2 620 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 SLC25A45Q8N413 288 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 GUF1Q8N442 669 aaKnown RBP15.89■□□□□ 0.13
MCF2L-228ENST00000487354 CARNMT1Q8N4J0 409 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 ZNF557Q8N988 423 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-228ENST00000487354 SLC39A13Q96H72 371 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 CYTH4Q9UIA0 394 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 RCOR1Q9UKL0 485 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 CA5BQ9Y2D0 317 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 COQ4Q9Y3A0 265 aa15.89■□□□□ 0.13
MCF2L-228ENST00000487354 KIF26BQ2KJY2 2108 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 J3QKU1 62 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 RTN2O75298 545 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 ADH1BP00325 375 aa15.88■□□□□ 0.13
MCF2L-228ENST00000487354 LTFP02788 710 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms