RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, human

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC1-208	ENST00000482310	DDX56	Q9NY93	547 aa	Known RBP	13.62	□□□□□ -0.23
HDAC1-208	ENST00000482310	MARK1	Q9P0L2	795 aa		13.62	□□□□□ -0.23
HDAC1-208	ENST00000482310	NEU3	Q9UQ49	428 aa		13.62	□□□□□ -0.23
HDAC1-208	ENST00000482310	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
HDAC1-208	ENST00000482310	ANKRD36	A6QL64	1941 aa		13.62	□□□□□ -0.23
HDAC1-208	ENST00000482310	F5	P12259	2224 aa		13.62	□□□□□ -0.23
HDAC1-208	ENST00000482310	IGLV3-10	A0A075B6K4	115 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310		A0A1B0GVM2	712 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	KRBA1	A5PL33	1030 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	GOLGA6L9	A6NEM1	432 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	TCAF2	A6NFQ2	919 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	CACNG3	O60359	315 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	PENK	P01210	267 aa	Predicted RBP	13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	RHOC	P08134	193 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	KDELR1	P24390	212 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	CTNNA2	P26232	953 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	OR1E1	P30953	314 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	CD70	P32970	193 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	CSK	P41240	450 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	CDH4	P55283	916 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	SEC13	P55735	322 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	DYNLT1	P63172	113 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	ZXDA	P98168	799 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	LMAN2	Q12907	356 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	ZNF177	Q13360	481 aa	Predicted RBP	13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	ARTN	Q5T4W7	220 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	MFSD7	Q6UXD7	560 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	POLN	Q7Z5Q5	900 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	RFX6	Q8HWS3	928 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	PSTK	Q8IV42	348 aa	Known RBP	13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	UBALD2	Q8IYN6	164 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	CCDC33	Q8N5R6	958 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	UBL4B	Q8N7F7	174 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	OR52K2	Q8NGK3	314 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	ALG3	Q92685	438 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	CELF6	Q96J87	481 aa	Known RBP	13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	CSPG4P5	Q96PW8	444 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	CATSPERB	Q9H7T0	1116 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	ARHGEF4	Q9NR80	690 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	NDFIP2	Q9NV92	336 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	ETNK2	Q9NVF9	386 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	DEC1	Q9P2X7	70 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	ZKSCAN5	Q9Y2L8	839 aa		13.61	□□□□□ -0.23
HDAC1-208	ENST00000482310	ANTXRL	A6NF34	631 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	DRGX	A6NNA5	263 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	DDX3Y	O15523	660 aa	Known RBP	13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	DCX	O43602	365 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	MAP3K6	O95382	1288 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	KRT10	P13645	584 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	RHOQ	P17081	205 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	ERCC2	P18074	760 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	MZF1	P28698	734 aa	Predicted RBP	13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	GALK1	P51570	392 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	ARSE	P51690	589 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	RWDD2B	P57060	319 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	GNG11	P61952	73 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	NRG1	Q02297	640 aa	Predicted RBP	13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	UBXN2B	Q14CS0	331 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	PDK2	Q15119	407 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	RPS6KA1	Q15418	735 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	ANKRD20A8P	Q5CZ79	823 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	MEI1	Q5TIA1	1274 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	LRRC38	Q5VT99	294 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	RNF219	Q5W0B1	726 aa	Predicted RBP	13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	CHST9	Q7L1S5	443 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	ANKS1B	Q7Z6G8	1248 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	MAP7D3	Q8IWC1	876 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	ETFBKMT	Q8IXQ9	262 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	KATNAL2	Q8IYT4	538 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	FAM3C	Q92520	227 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	ERLEC1	Q96DZ1	483 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	PNKP	Q96T60	521 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	P2RY13	Q9BPV8	354 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	HEMGN	Q9BXL5	484 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	FOXQ1	Q9C009	403 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	MUC3B	Q9H195	1237 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	ZDHHC4	Q9NPG8	344 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	GGA2	Q9UJY4	613 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	HCN4	Q9Y3Q4	1203 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	PCDHA3	Q9Y5H8	950 aa		13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	MUC22	E2RYF6	1773 aa	Predicted RBP	13.6	□□□□□ -0.23
HDAC1-208	ENST00000482310	TECTA	O75443	2155 aa		13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	CCDC66	A2RUB6	948 aa		13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	C3orf70	A6NLC5	250 aa	Predicted RBP	13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	FGF10	O15520	208 aa	Predicted RBP	13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	CLDN11	O75508	207 aa		13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	EGF	P01133	1207 aa		13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	APOD	P05090	189 aa		13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	HLA-F	P30511	346 aa		13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	CXCR5	P32302	372 aa		13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	AMPD2	Q01433	879 aa		13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	DPYS	Q14117	519 aa		13.59	□□□□□ -0.23
HDAC1-208	ENST00000482310	GEN1	Q17RS7	908 aa		13.59	□□□□□ -0.23

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