RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 FUCA2Q9BTY2 467 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 WDCPQ9H6R7 721 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 PRSS16Q9NQE7 514 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 NUMA1Q14980 2115 aa22.46■■□□□ 1.19
COL9A3-211ENST00000477612 CACNA1EQ15878 2313 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 SMTNL1A8MU46 457 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 MOCS3O95396 460 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 FLT3P36888 993 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 SULT1E1P49888 294 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 RNASE9P60153 205 aaKnown RBP22.45■■□□□ 1.18
COL9A3-211ENST00000477612 IRX4P78413 519 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 C2CD6Q53TS8 623 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 ACBD5Q5T8D3 534 aaPredicted RBP22.45■■□□□ 1.18
COL9A3-211ENST00000477612 TRNP1Q6NT89 227 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 CAVIN1Q6NZI2 390 aaKnown RBP22.45■■□□□ 1.18
COL9A3-211ENST00000477612 ARMCX6Q7L4S7 300 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 CADM4Q8NFZ8 388 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 IGSF8Q969P0 613 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 TOE1Q96GM8 510 aaKnown RBP22.45■■□□□ 1.18
COL9A3-211ENST00000477612 EDEM2Q9BV94 578 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 ERVW-1Q9UQF0 538 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 ITIH6Q6UXX5 1313 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 PCDH15Q96QU1 1955 aa22.45■■□□□ 1.18
COL9A3-211ENST00000477612 DCDC2BA2VCK2 349 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 I6L893 689 aaPredicted RBP22.44■■□□□ 1.18
COL9A3-211ENST00000477612 NDUFS2O75306 463 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 PAGE1O75459 146 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 ENDOD1O94919 500 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 ADCY5O95622 1261 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 VASPP50552 380 aaPredicted RBP22.44■■□□□ 1.18
COL9A3-211ENST00000477612 OXCT1P55809 520 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 GSCP56915 257 aaPredicted RBP22.44■■□□□ 1.18
COL9A3-211ENST00000477612 ZBTB16Q05516 673 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 CXorf57Q6NSI4 855 aaKnown RBP22.44■■□□□ 1.18
COL9A3-211ENST00000477612 APCDD1Q8J025 514 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 ZNF366Q8N895 744 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 CEP76Q8TAP6 659 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 FOXJ1Q92949 421 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 C1orf74Q96LT6 269 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 PCMTD1Q96MG8 357 aaPredicted RBP22.44■■□□□ 1.18
COL9A3-211ENST00000477612 TBCBQ99426 244 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 NUP58Q9BVL2 599 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 TKTL2Q9H0I9 626 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 RTN4Q9NQC3 1192 aaKnown RBP22.44■■□□□ 1.18
COL9A3-211ENST00000477612 ANLNQ9NQW6 1124 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 PAXBP1Q9Y5B6 917 aa22.44■■□□□ 1.18
COL9A3-211ENST00000477612 CNOT1A5YKK6 2376 aaKnown RBP22.43■■□□□ 1.18
COL9A3-211ENST00000477612 CDX4O14627 284 aaPredicted RBP22.43■■□□□ 1.18
COL9A3-211ENST00000477612 ACADMP11310 421 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 ST8SIA6P61647 398 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 ECT2LQ008S8 904 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 CENPCQ03188 943 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 DEUP1Q05D60 604 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 PTP4A2Q12974 167 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 DUOXA1Q1HG43 343 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 HNRNPA1L2Q32P51 320 aaKnown RBP22.43■■□□□ 1.18
COL9A3-211ENST00000477612 TRIM61Q5EBN2 209 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 SND1Q7KZF4 910 aaKnown RBP eCLIP22.43■■□□□ 1.181e-17■■■□□ 14.9
COL9A3-211ENST00000477612 RABEPKQ7Z6M1 372 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 C14orf80Q86SX3 495 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 ZNF683Q8IZ20 524 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 DEFB119Q8N690 84 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 DNASE2BQ8WZ79 361 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 ALG14Q96F25 216 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 HSPA12BQ96MM6 686 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 RPRD1AQ96P16 312 aaPredicted RBP22.43■■□□□ 1.18
COL9A3-211ENST00000477612 PPP1R9BQ96SB3 815 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 PCDHB18PQ96TA0 734 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 NUSAP1Q9BXS6 441 aaKnown RBP22.43■■□□□ 1.18
COL9A3-211ENST00000477612 VANGL2Q9ULK5 521 aa22.43■■□□□ 1.18
COL9A3-211ENST00000477612 ASCC3Q8N3C0 2202 aaKnown RBP22.42■■□□□ 1.18
COL9A3-211ENST00000477612 MED19A0JLT2 244 aaPredicted RBP22.42■■□□□ 1.18
COL9A3-211ENST00000477612 TARSL2A2RTX5 802 aaKnown RBP22.42■■□□□ 1.18
COL9A3-211ENST00000477612 GOLGA8SH3BPF8 625 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 TEX33O43247 280 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 ZNF165P49910 485 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 RPS14P62263 151 aaKnown RBP22.42■■□□□ 1.18
COL9A3-211ENST00000477612 SULT2A1Q06520 285 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 IQCB1Q15051 598 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 KLHL40Q2TBA0 621 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 IL31Q6EBC2 164 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 PCED1AQ9H1Q7 454 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 RSPH9Q9H1X1 276 aaPredicted RBP22.42■■□□□ 1.18
COL9A3-211ENST00000477612 CAPN10Q9HC96 672 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 MYO6Q9UM54 1294 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 SLC6A14Q9UN76 642 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 TBC1D30Q9Y2I9 924 aa22.42■■□□□ 1.18
COL9A3-211ENST00000477612 CHD5Q8TDI0 1954 aa22.41■■□□□ 1.18
COL9A3-211ENST00000477612 DRGXA6NNA5 263 aa22.41■■□□□ 1.18
COL9A3-211ENST00000477612 CLDN11O75508 207 aa22.41■■□□□ 1.18
COL9A3-211ENST00000477612 SERPINF2P08697 491 aa22.41■■□□□ 1.18
COL9A3-211ENST00000477612 MZF1P28698 734 aaPredicted RBP22.41■■□□□ 1.18
COL9A3-211ENST00000477612 CTSOP43234 321 aaPredicted RBP22.41■■□□□ 1.18
COL9A3-211ENST00000477612 CDH4P55283 916 aa22.41■■□□□ 1.18
COL9A3-211ENST00000477612 SYCP2LQ5T4T6 812 aa22.41■■□□□ 1.18
COL9A3-211ENST00000477612 ARTNQ5T4W7 220 aa22.41■■□□□ 1.18
COL9A3-211ENST00000477612 CIR1Q86X95 450 aaPredicted RBP22.41■■□□□ 1.18
COL9A3-211ENST00000477612 PHF13Q86YI8 300 aaPredicted RBP22.41■■□□□ 1.18
COL9A3-211ENST00000477612 HAPLN3Q96S86 360 aa22.41■■□□□ 1.18
COL9A3-211ENST00000477612 GPR174Q9BXC1 333 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms