RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 PRIM2P49643 509 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 AK2P54819 239 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 KRTAP10-6P60371 365 aaPredicted RBP4.68□□□□□ -1.66
UBR3-209ENST00000477461 KLHDC7AQ5VTJ3 777 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 UEVLDQ8IX04 471 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 CCDC146Q8IYE0 955 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 ATP11CQ8NB49 1132 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 AKAP1Q92667 903 aaKnown RBP eCLIP4.68□□□□□ -1.66
UBR3-209ENST00000477461 LRRC46Q96FV0 321 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 TUBB6Q9BUF5 446 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 ZCWPW1Q9H0M4 648 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 AAMDCQ9H7C9 122 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 MRPL44Q9H9J2 332 aaKnown RBP4.68□□□□□ -1.66
UBR3-209ENST00000477461 DECR2Q9NUI1 292 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 ANAPC4Q9UJX5 808 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 PHTF1Q9UMS5 762 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 TECPR2O15040 1411 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 PTCH1Q13635 1447 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 FAM135BQ49AJ0 1406 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 PTPRUQ92729 1446 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 NWD1Q149M9 1564 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 A0A1W2PPC4 97 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 RASA4BC9J798 803 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 RASA4O43374 803 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 THAP12O43422 761 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 ZC3H11AO75152 810 aaKnown RBP eCLIP4.67□□□□□ -1.66
UBR3-209ENST00000477461 EPN2O95208 641 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 SLC3A2P08195 630 aaKnown RBP4.67□□□□□ -1.66
UBR3-209ENST00000477461 CDC25AP30304 524 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 SLC12A2P55011 1212 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 HDAC1Q13547 482 aaPredicted RBP4.67□□□□□ -1.66
UBR3-209ENST00000477461 KCNJ12Q14500 433 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 ELF2Q15723 593 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 ODF3L2Q3SX64 289 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 CRTC1Q6UUV9 634 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 RFX8Q6ZV50 586 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 KRT28Q7Z3Y7 464 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 RBMXL3Q8N7X1 1067 aaKnown RBP4.67□□□□□ -1.66
UBR3-209ENST00000477461 SLC44A5Q8NCS7 719 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 EIF2AQ9BY44 585 aaKnown RBP4.67□□□□□ -1.66
UBR3-209ENST00000477461 TMEM8AQ9HCN3 771 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 HEYLQ9NQ87 328 aaPredicted RBP4.67□□□□□ -1.66
UBR3-209ENST00000477461 GJB4Q9NTQ9 266 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 MYO1AQ9UBC5 1043 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 CORO2BQ9UQ03 480 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 EVC2Q86UK5 1308 aa4.67□□□□□ -1.66
UBR3-209ENST00000477461 ZNF335Q9H4Z2 1342 aaPredicted RBP4.67□□□□□ -1.66
UBR3-209ENST00000477461 PLEKHH1Q9ULM0 1364 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 STRCP1A6NGW2 1772 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 A0A087WZ62 844 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 TRBV5-3A0A0A0MS03 114 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 TTC34A8MYJ7 566 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 F8W810 466 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 USP12O75317 370 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 ARP10275 920 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 ALADP13716 330 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 HOXD12P35452 270 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 ALDH7A1P49419 539 aaKnown RBP4.66□□□□□ -1.66
UBR3-209ENST00000477461 AGTR2P50052 363 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 DGKQP52824 942 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 GPS1Q13098 491 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 UBE4AQ14139 1066 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 PTGR1Q14914 329 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 TMEM196Q5HYL7 178 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 KYAT3Q6YP21 454 aaKnown RBP4.66□□□□□ -1.66
UBR3-209ENST00000477461 B4GALNT2Q8NHY0 566 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 BCAS4Q8TDM0 211 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 ABHD5Q8WTS1 349 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 MSI2Q96DH6 328 aaKnown RBP4.66□□□□□ -1.66
UBR3-209ENST00000477461 IQCDQ96DY2 449 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 SLC39A13Q96H72 371 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 TBCBQ99426 244 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 TTLL2Q9BWV7 592 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 GATA5Q9BWX5 397 aaPredicted RBP4.66□□□□□ -1.66
UBR3-209ENST00000477461 PCDHA12Q9UN75 941 aa4.66□□□□□ -1.66
UBR3-209ENST00000477461 MSH6P52701 1360 aa4.65□□□□□ -1.66
UBR3-209ENST00000477461 TMEM94Q12767 1356 aa4.65□□□□□ -1.66
UBR3-209ENST00000477461 ADGRL3Q9HAR2 1447 aa4.65□□□□□ -1.66
UBR3-209ENST00000477461 NCOA3Q9Y6Q9 1424 aa4.65□□□□□ -1.66
UBR3-209ENST00000477461 POM121BA6NF01 834 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 LACTBL1A8MY62 500 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 KPNA5O15131 536 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 KCNQ3O43525 872 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 TLX3O43711 291 aaPredicted RBP4.65□□□□□ -1.67
UBR3-209ENST00000477461 COQ9O75208 318 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 FGF18O76093 207 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 FGFR2P21802 821 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 NDUFS1P28331 727 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 DUSP1P28562 367 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 IGHMBP2P38935 993 aaKnown RBP4.65□□□□□ -1.67
UBR3-209ENST00000477461 HTR3AP46098 478 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 STT3AP46977 705 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 P3H1Q32P28 736 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 IL31Q6EBC2 164 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 ABLIM2Q6H8Q1 611 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 DHRS13Q6UX07 377 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 BEND5Q7L4P6 421 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 RFX6Q8HWS3 928 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 RHPN2Q8IUC4 686 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 ARL14EPQ8N8R7 260 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms