RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 MAGEB16A2A368 324 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 SMIM22K7EJ46 135 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 TCHHL1Q5QJ38 904 aaPredicted RBP18.94■□□□□ 0.62
VARS2-209ENST00000477288 KCNMB4Q86W47 210 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 OSCP1Q8WVF1 389 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 OMDQ99983 421 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 LIMD1Q9UGP4 676 aa18.94■□□□□ 0.62
VARS2-209ENST00000477288 TBC1D3BA6NDS4 549 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 GZMAP12544 262 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 AMPD1P23109 780 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 BEX3Q00994 111 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 FAM20CQ8IXL6 584 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 ABRAQ8N0Z2 381 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 DNAJC1Q96KC8 554 aaKnown RBP18.93■□□□□ 0.62
VARS2-209ENST00000477288 TBL1YQ9BQ87 522 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 LACTBL1A8MY62 500 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 FASP25445 335 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 PSMD7P51665 324 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 N4BP2L1Q5TBK1 243 aaPredicted RBP18.93■□□□□ 0.62
VARS2-209ENST00000477288 INPP4BO15327 924 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 CLPTM1O96005 669 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 ACVR2BQ13705 512 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 CNGA2Q16280 664 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 RTL3Q8N8U3 475 aaKnown RBP18.93■□□□□ 0.62
VARS2-209ENST00000477288 SLC2A14Q8TDB8 520 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 NSMCE2Q96MF7 247 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 ZNF624Q9P2J8 865 aaPredicted RBP18.93■□□□□ 0.62
VARS2-209ENST00000477288 PLAGL2Q9UPG8 496 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 AKAP3O75969 853 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 BDNFP23560 247 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 THOP1P52888 689 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 MAD2L1Q13257 205 aaPredicted RBP18.93■□□□□ 0.62
VARS2-209ENST00000477288 MTA1Q13330 715 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 MAPK11Q15759 364 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 TMC5Q6UXY8 1006 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 SCUBE3Q8IX30 993 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 REPS1Q96D71 796 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 DAPK2Q9UIK4 370 aa18.93■□□□□ 0.62
VARS2-209ENST00000477288 CAPN15O75808 1086 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 MGAT1P26572 445 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 ELOVL4Q9GZR5 314 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 SOHLH2Q9NX45 425 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 USP17L7P0C7H9 530 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 TGFB3P10600 412 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 GPR15P49685 360 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 MILR1Q7Z6M3 343 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 TRAPPC5Q8IUR0 188 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 P2RX7Q99572 595 aaKnown RBP18.92■□□□□ 0.62
VARS2-209ENST00000477288 TMBIM4Q9HC24 238 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 RRN3Q9NYV6 651 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 UBA2Q9UBT2 640 aaPredicted RBP18.92■□□□□ 0.62
VARS2-209ENST00000477288 MKL2Q9ULH7 1088 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 MYL12AP19105 171 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 FMO4P31512 558 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 IKBKEQ14164 716 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 TSNQ15631 228 aaKnown RBP18.92■□□□□ 0.62
VARS2-209ENST00000477288 AKIRIN2Q53H80 203 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 DNAAF5Q86Y56 855 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 CDCA5Q96FF9 252 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 CEP170BQ9Y4F5 1589 aaPredicted RBP18.92■□□□□ 0.62
VARS2-209ENST00000477288 ZBTB22O15209 634 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 TUFMP49411 452 aaKnown RBP18.92■□□□□ 0.62
VARS2-209ENST00000477288 SERPINH1P50454 418 aaKnown RBP18.92■□□□□ 0.62
VARS2-209ENST00000477288 MARSP56192 900 aaKnown RBP18.92■□□□□ 0.62
VARS2-209ENST00000477288 CCNIQ14094 377 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 CES3Q6UWW8 571 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 UBASH3BQ8TF42 649 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 PIK3R5Q8WYR1 880 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 ABHD16BQ9H3Z7 469 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 EXO5Q9H790 373 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 POLE3Q9NRF9 147 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 USP20Q9Y2K6 914 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 CXCL11O14625 94 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 ADCYAP1R1P41586 468 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 MMP14P50281 582 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 CCNG2Q16589 344 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 ZNF571Q7Z3V5 609 aaPredicted RBP18.92■□□□□ 0.62
VARS2-209ENST00000477288 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.92■□□□□ 0.62
VARS2-209ENST00000477288 ADPRHL2Q9NX46 363 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 NUDT5Q9UKK9 219 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 CHKBQ9Y259 395 aa18.92■□□□□ 0.62
VARS2-209ENST00000477288 RIMBP3CA6NJZ7 1639 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 RIMBP3BA6NNM3 1639 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 RIMBP3Q9UFD9 1639 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 MYL12BO14950 172 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 ATP5BP06576 529 aaKnown RBP18.91■□□□□ 0.62
VARS2-209ENST00000477288 ATP1A4Q13733 1029 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 GRTP1Q5TC63 336 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 FANCEQ9HB96 536 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 TAS2R13Q9NYV9 303 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 MSRAQ9UJ68 235 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 NDUFAF1Q9Y375 327 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 AXLP30530 894 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 SCTRP47872 440 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 ARMC12Q5T9G4 340 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 ACTL9Q8TC94 416 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 ZNF839A8K0R7 811 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 OR6B1O95007 311 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 TSPAN19P0C672 248 aa18.91■□□□□ 0.62
VARS2-209ENST00000477288 YBX3P16989 372 aaKnown RBP eCLIP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms