RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 FAM153BP0C7A2 387 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 RARAP10276 462 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 VEGFAP15692 232 aaPredicted RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 PRLRP16471 622 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 FASP25445 335 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 MCL1Q07820 350 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 C15orf59Q2T9L4 293 aaPredicted RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 FAM153CQ494X1 144 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 CBWD6Q4V339 395 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 SPANXN3Q5MJ09 141 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 WDR93Q6P2C0 686 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 DLC1Q96QB1 1528 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 CLPTM1O96005 669 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 ETS1P14921 441 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 POLR2EP19388 210 aaKnown RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 CCDC153Q494R4 210 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 RNF145Q96MT1 663 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 KLHL25Q9H0H3 589 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 DCLRE1BQ9H816 532 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 PAIP2BQ9ULR5 123 aaKnown RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 ERVK-9P63128 1117 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 LLGL2Q6P1M3 1020 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 IL27RAQ6UWB1 636 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 GPSM1Q86YR5 675 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 POMGNT2Q8NAT1 580 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 VPS33AQ96AX1 596 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 PHACTR1Q9C0D0 580 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 EHD4Q9H223 541 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 ABHD16BQ9H3Z7 469 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 AVENQ9NQS1 362 aaPredicted RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 DCXO43602 365 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 PDE5AO76074 875 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 DLG4P78352 724 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 IFI35P80217 286 aaPredicted RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 TRIM32Q13049 653 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 ARMCX4Q5H9R4 360 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 LRRN4Q8WUT4 740 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 PRCCQ92733 491 aaPredicted RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 OMDQ99983 421 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 RNF208Q9H0X6 261 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 DDX4Q9NQI0 724 aaKnown RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 KLHL28Q9NXS3 571 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 HES2Q9Y543 173 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 NUMA1Q14980 2115 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 CES2O00748 559 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 NPY2RP49146 381 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 GPR15P49685 360 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 NTRK3Q16288 839 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 KCTD19Q17RG1 926 aaPredicted RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 NOL9Q5SY16 702 aaKnown RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 DDI2Q5TDH0 399 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 RETSATQ6NUM9 610 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 FBXL19Q6PCT2 694 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 CCDC149Q6ZUS6 474 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 HDAC7Q8WUI4 952 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 NSMCE2Q96MF7 247 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 VPS45Q9NRW7 570 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 IL1RAPL1Q9NZN1 696 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 SLC9A8Q9Y2E8 581 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 TCHHQ07283 1943 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 TCRBV5S4A2TA0A5A2 114 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 RTN3O95197 1032 aaPredicted RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 IGSF6O95976 241 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 CNPP09543 421 aaKnown RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 RBL1P28749 1068 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 NEDD8Q15843 81 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 NEK10Q6ZWH5 1172 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.17□□□□□ -0.62
VAPB-204ENST00000475243 MCOLN3Q8TDD5 553 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 HIC2Q96JB3 615 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 POLR1DQ9Y2S0 133 aa11.17□□□□□ -0.62
VAPB-204ENST00000475243 EIF2S1P05198 315 aaKnown RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 CTSEP14091 401 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 STX4Q12846 297 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 FAM83AQ86UY5 434 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 SLC41A1Q8IVJ1 513 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 FAM126BQ8IXS8 530 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 CYP4Z2PQ8N1L4 340 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 CPNE1Q99829 537 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 SH3GL2Q99962 352 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 HMX1Q9NP08 348 aaPredicted RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 BPIFA1Q9NP55 256 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 ACP6Q9NPH0 428 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 NCKAP1Q9Y2A7 1128 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 ANKRD63C9JTQ0 380 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 CRABP2P29373 138 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 FAAP100Q0VG06 881 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 HLA-DQA1Q5Y7H0 255 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 CXCL17Q6UXB2 119 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 SENP8Q96LD8 212 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 ADI1Q9BV57 179 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 REXO4Q9GZR2 422 aaKnown RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 SEMA6AQ9H2E6 1030 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 ARMC7Q9H6L4 198 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 CATSPERZQ9NTU4 200 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 F8VP50 259 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 PHGDHO43175 533 aaKnown RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 ZBTB14O43829 449 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 AMHP03971 560 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms