RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SERPINI2O75830 405 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 RFPL3SP0C7P2 107 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 DGKAP23743 735 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 SLC7A1P30825 629 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 SLC16A2P36021 539 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 PEX5P50542 639 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 RBM6P78332 1123 aaKnown RBP2.19□□□□□ -2.06
CCDC39-203ENST00000473854 DUSP6Q16828 381 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 MANEALQ5VSG8 457 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 PLAG1Q6DJT9 500 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 Q6ZSV7 163 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 ZNF367Q7RTV3 350 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 IGFN1Q86VF2 1251 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 KLHDC8BQ8IXV7 354 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 ADPRHL1Q8NDY3 354 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 NMD3Q96D46 503 aaKnown RBP2.19□□□□□ -2.06
CCDC39-203ENST00000473854 BICD1Q96G01 975 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 ZNF419Q96HQ0 510 aaPredicted RBP2.19□□□□□ -2.06
CCDC39-203ENST00000473854 CCDC8Q9H0W5 538 aaPredicted RBP2.19□□□□□ -2.06
CCDC39-203ENST00000473854 PRDM16Q9HAZ2 1276 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 HPSEQ9Y251 543 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 TNFSF13BQ9Y275 285 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 ADAM18Q9Y3Q7 739 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 WDR97A6NE52 1622 aa2.19□□□□□ -2.06
CCDC39-203ENST00000473854 KIF21AQ7Z4S6 1674 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 MAGEA13PA6NCF6 341 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 ALG1L2C9J202 215 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 H3BML4 177 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 CLGNO14967 610 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 TXNP10599 105 aaKnown RBP2.18□□□□□ -2.06
CCDC39-203ENST00000473854 DRD1P21728 446 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 ITGB8P26012 769 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 HTR1BP28222 390 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 POLE2P56282 527 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 KRTAP12-2P59991 146 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 ST3GAL1Q11201 340 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 GRSF1Q12849 480 aaKnown RBP eCLIP2.18□□□□□ -2.06
CCDC39-203ENST00000473854 SEMA3BQ13214 749 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 BFSP2Q13515 415 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 HDAC1Q13547 482 aaPredicted RBP2.18□□□□□ -2.06
CCDC39-203ENST00000473854 CBFBQ13951 182 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 GALNT3Q14435 633 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 RBBP5Q15291 538 aaKnown RBP2.18□□□□□ -2.06
CCDC39-203ENST00000473854 ELF2Q15723 593 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 ENTPD8Q5MY95 495 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 SDE2Q6IQ49 451 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 ACSM6Q6P461 480 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 ANKRD44Q8N8A2 993 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 MAB21L3Q8N8X9 362 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 ABHD5Q8WTS1 349 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 CD101Q93033 1021 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 MOV10L1Q9BXT6 1211 aaKnown RBP2.18□□□□□ -2.06
CCDC39-203ENST00000473854 ZMAT3Q9HA38 289 aaKnown RBP2.18□□□□□ -2.06
CCDC39-203ENST00000473854 AFF4Q9UHB7 1163 aaKnown RBP2.18□□□□□ -2.06
CCDC39-203ENST00000473854 POU2F3Q9UKI9 436 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 CAPN11Q9UMQ6 739 aa2.18□□□□□ -2.06
CCDC39-203ENST00000473854 TMA7Q9Y2S6 64 aaKnown RBP2.18□□□□□ -2.06
CCDC39-203ENST00000473854 BAZ1BQ9UIG0 1483 aaKnown RBP2.18□□□□□ -2.06
CCDC39-203ENST00000473854 IGLV5-37A0A075B6J1 123 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 IGLV5-52A0A0A0MRZ9 124 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 ISM1B1AKI9 464 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 ZNF500O60304 480 aaPredicted RBP2.17□□□□□ -2.06
CCDC39-203ENST00000473854 PBX1P40424 430 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 NSUN2Q08J23 767 aaKnown RBP eCLIP2.17□□□□□ -2.06
CCDC39-203ENST00000473854 C10orf76Q5T2E6 689 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 FAM90A2PQ658T7 463 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 GIMAP6Q6P9H5 292 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 CLASRPQ8N2M8 674 aaKnown RBP2.17□□□□□ -2.06
CCDC39-203ENST00000473854 IL17RCQ8NAC3 791 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 SRFBP1Q8NEF9 429 aaKnown RBP2.17□□□□□ -2.06
CCDC39-203ENST00000473854 LRRC8CQ8TDW0 803 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 SECTM1Q8WVN6 248 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 GPR78Q96P69 363 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 B3GNT4Q9C0J1 378 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 SLC25A32Q9H2D1 315 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 EVA1AQ9H8M9 152 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 SACM1LQ9NTJ5 587 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 MID2Q9UJV3 735 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 SRPRBQ9Y5M8 271 aaKnown RBP2.17□□□□□ -2.06
CCDC39-203ENST00000473854 CACNA1FO60840 1977 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 TOP2BQ02880 1626 aa2.17□□□□□ -2.06
CCDC39-203ENST00000473854 LINC01553A4QN01 128 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 PRAC2D3DTV9 90 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 KIF3BO15066 747 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 TBX3O15119 743 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 MSI1O43347 362 aaKnown RBP2.16□□□□□ -2.06
CCDC39-203ENST00000473854 XPNPEP2O43895 674 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 FGF17O60258 216 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 PPP6R2O75170 966 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 KATNA1O75449 491 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 NEURL1O76050 574 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 CNTN5O94779 1100 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 SOX30O94993 753 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 IL18RAPO95256 599 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 NAGAP17050 411 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 NCLP19338 710 aaKnown RBP2.16□□□□□ -2.06
CCDC39-203ENST00000473854 BTF3P20290 206 aaKnown RBP2.16□□□□□ -2.06
CCDC39-203ENST00000473854 GNLYP22749 145 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms