RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.16□□□□□ -0.94
LDB1-203ENST00000461873 EIF2B4Q9UI10 523 aaKnown RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 VPS28Q9UK41 221 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 ERVW-1Q9UQF0 538 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 ANKRD62A6NC57 917 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 C1QTNF3-AMACRE9PGA6 284 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 TM4SF5O14894 197 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 BNIP3LO60238 219 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 ADH1BP00325 375 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 IL1BP01584 269 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 FYNP06241 537 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 CCDC172P0C7W6 258 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 PDGFRAP16234 1089 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 RECQLP46063 649 aaPredicted RBP9.15□□□□□ -0.94
LDB1-203ENST00000461873 SGSHP51688 502 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 COPAP53621 1224 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 RPS14P62263 151 aaKnown RBP9.15□□□□□ -0.94
LDB1-203ENST00000461873 SIM1P81133 766 aaPredicted RBP9.15□□□□□ -0.94
LDB1-203ENST00000461873 DEUP1Q05D60 604 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 GRIK2Q13002 908 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 ARL13BQ3SXY8 428 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 TAF3Q5VWG9 929 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 TMEM215Q68D42 235 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 FAM183BPQ6ZVS7 135 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 USP30Q70CQ3 517 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 GPT2Q8TD30 523 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 DNASE2BQ8WZ79 361 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 SLC39A13Q96H72 371 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 ACE2Q9BYF1 805 aaPredicted RBP9.15□□□□□ -0.94
LDB1-203ENST00000461873 VPS16Q9H269 839 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 GAREM1Q9H706 876 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 CAPN10Q9HC96 672 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 ACP6Q9NPH0 428 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 FSCN3Q9NQT6 498 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 DYRK4Q9NR20 520 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 SEPT11Q9NVA2 429 aaKnown RBP9.15□□□□□ -0.94
LDB1-203ENST00000461873 ANO10Q9NW15 660 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 VANGL2Q9ULK5 521 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 TPX2Q9ULW0 747 aaKnown RBP9.15□□□□□ -0.94
LDB1-203ENST00000461873 DAAM1Q9Y4D1 1078 aa9.15□□□□□ -0.94
LDB1-203ENST00000461873 CKAP5Q14008 2032 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 TBC1D3DA0A087WVF3 549 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 TBC1D3IA0A087WXS9 549 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 TBC1D3EA0A087X179 549 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 TBC1D3KA0A087X1G2 549 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 A0A1W2PP55 124 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 TBC1D3FA6NER0 549 aaPredicted RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 BECN2A8MW95 431 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 TBC1D3LB9A6J9 549 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 GOLGA8SH3BPF8 625 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 SIN3BO75182 1162 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 CLDN11O75508 207 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 DAB1O75553 588 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 LSM8O95777 96 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 MBD3O95983 291 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 IGLV3-19P01714 112 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 RHOCP08134 193 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 TBC1D3HP0C7X1 549 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 CHRM1P11229 460 aaPredicted RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 UCHL3P15374 230 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 CYP11B1P15538 503 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 SLC8A1P32418 973 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 ACSL1P33121 698 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 PSMD8P48556 350 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 APBA1Q02410 837 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 AUHQ13825 339 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 ELAVL3Q14576 367 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 TAF5Q15542 800 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 CST6Q15828 149 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 PTPRNQ16849 979 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 HNRNPA1L2Q32P51 320 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 BRMS1LQ5PSV4 323 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 C6orf118Q5T5N4 469 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 KLHDC7AQ5VTJ3 777 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 TBC1D3GQ6DHY5 549 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 NADSYN1Q6IA69 706 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 TBC1D3CQ6IPX1 549 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 SLC26A9Q7LBE3 791 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 KIAA0907Q7Z7F0 614 aaPredicted RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 ZNF677Q86XU0 584 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 MMAAQ8IVH4 418 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 FAM71AQ8IYT1 594 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 TBC1D3Q8IZP1 549 aaPredicted RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 CCAR2Q8N163 923 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 NEK11Q8NG66 645 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 ENOX1Q8TC92 643 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 OR8D1Q8WZ84 308 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 RPL10LQ96L21 214 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 PRICKLE1Q96MT3 831 aaPredicted RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 SLC2A13Q96QE2 648 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 C2orf49Q9BVC5 232 aaPredicted RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 STK33Q9BYT3 514 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 TKTL2Q9H0I9 626 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 RSPH9Q9H1X1 276 aaPredicted RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 PABPC3Q9H361 631 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 CD93Q9NPY3 652 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 PLCB1Q9NQ66 1216 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 AASDHPPTQ9NRN7 309 aa9.14□□□□□ -0.95
LDB1-203ENST00000461873 DNAAF2Q9NVR5 837 aaKnown RBP9.14□□□□□ -0.95
LDB1-203ENST00000461873 TAB2Q9NYJ8 693 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms