RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 A0A1B0GVM2 712 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 TCAF2A6NFQ2 919 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 I6L893 689 aaPredicted RBP17.02■□□□□ 0.32
SHANK2-213ENST00000460048 PAGE1O75459 146 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 F9P00740 461 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 MMP8P22894 467 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 HOXD12P35452 270 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 TPMTP51580 245 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 IRX4P78413 519 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 SLC12A1Q13621 1099 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 AUHQ13825 339 aaKnown RBP17.02■□□□□ 0.32
SHANK2-213ENST00000460048 PLEKHG6Q3KR16 790 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 RABGAP1LQ5R372 815 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 CXorf57Q6NSI4 855 aaKnown RBP17.02■□□□□ 0.32
SHANK2-213ENST00000460048 TRIM72Q6ZMU5 477 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 CIR1Q86X95 450 aaPredicted RBP17.02■□□□□ 0.32
SHANK2-213ENST00000460048 APCDD1Q8J025 514 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 TBCBQ99426 244 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 EDEM2Q9BV94 578 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 WDCPQ9H6R7 721 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 TMEM51Q9NW97 253 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 ERVW-1Q9UQF0 538 aa17.02■□□□□ 0.32
SHANK2-213ENST00000460048 ITIH6Q6UXX5 1313 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 ATXN2Q99700 1313 aaKnown RBP17.01■□□□□ 0.31
SHANK2-213ENST00000460048 MED19A0JLT2 244 aaPredicted RBP17.01■□□□□ 0.31
SHANK2-213ENST00000460048 SMTNL1A8MU46 457 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 GOLGA8SH3BPF8 625 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 NDUFS2O75306 463 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 MOCS3O95396 460 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 ADCY5O95622 1261 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 SRPRAP08240 638 aaKnown RBP17.01■□□□□ 0.31
SHANK2-213ENST00000460048 UNGP13051 313 aaPredicted RBP17.01■□□□□ 0.31
SHANK2-213ENST00000460048 OXTRP30559 389 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 CTSOP43234 321 aaPredicted RBP17.01■□□□□ 0.31
SHANK2-213ENST00000460048 IRAK1P51617 712 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 PLK1P53350 603 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 DEUP1Q05D60 604 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 ARID5BQ14865 1188 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 SLC23A3Q6PIS1 610 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 C14orf80Q86SX3 495 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 TOE1Q96GM8 510 aaKnown RBP17.01■□□□□ 0.31
SHANK2-213ENST00000460048 HSPA12BQ96MM6 686 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 RPRD1AQ96P16 312 aaPredicted RBP17.01■□□□□ 0.31
SHANK2-213ENST00000460048 PCDHB18PQ96TA0 734 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 TKTL2Q9H0I9 626 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
SHANK2-213ENST00000460048 VANGL2Q9ULK5 521 aa17.01■□□□□ 0.31
SHANK2-213ENST00000460048 CDX4O14627 284 aaPredicted RBP17■□□□□ 0.31
SHANK2-213ENST00000460048 TEX33O43247 280 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 ACADMP11310 421 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 MZF1P28698 734 aaPredicted RBP17■□□□□ 0.31
SHANK2-213ENST00000460048 GGCXP38435 758 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 ST8SIA6P61647 398 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 RPS14P62263 151 aaKnown RBP17■□□□□ 0.31
SHANK2-213ENST00000460048 ECT2LQ008S8 904 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 CENPCQ03188 943 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 PTP4A2Q12974 167 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 HNRNPA1L2Q32P51 320 aaKnown RBP17■□□□□ 0.31
SHANK2-213ENST00000460048 TRIM61Q5EBN2 209 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 SND1Q7KZF4 910 aaKnown RBP eCLIP17■□□□□ 0.31
SHANK2-213ENST00000460048 CACUL1Q86Y37 369 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 ZNF683Q8IZ20 524 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 OR52K2Q8NGK3 314 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 SLC30A5Q8TAD4 765 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 FOXJ1Q92949 421 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 ALG14Q96F25 216 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 CFAP57Q96MR6 1250 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 NUP58Q9BVL2 599 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 MTG2Q9H4K7 406 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 METTL5Q9NRN9 209 aaKnown RBP17■□□□□ 0.31
SHANK2-213ENST00000460048 CHD5Q8TDI0 1954 aa17■□□□□ 0.31
SHANK2-213ENST00000460048 ASCC3Q8N3C0 2202 aaKnown RBP17■□□□□ 0.31
SHANK2-213ENST00000460048 CACNA1EQ15878 2313 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 ENDOD1O94919 500 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 PDGFRAP16234 1089 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 ZNF165P49910 485 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 OXCT1P55809 520 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 GSCP56915 257 aaPredicted RBP16.99■□□□□ 0.31
SHANK2-213ENST00000460048 ZBTB16Q05516 673 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 IQCB1Q15051 598 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 DUOXA1Q1HG43 343 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 KLHL40Q2TBA0 621 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 ARTNQ5T4W7 220 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 IL31Q6EBC2 164 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 CADM4Q8NFZ8 388 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 CEP76Q8TAP6 659 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 C1orf74Q96LT6 269 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 C11orf70Q9BRQ4 267 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 GPR174Q9BXC1 333 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 NUSAP1Q9BXS6 441 aaKnown RBP16.99■□□□□ 0.31
SHANK2-213ENST00000460048 SIK2Q9H0K1 926 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 RSPH9Q9H1X1 276 aaPredicted RBP16.99■□□□□ 0.31
SHANK2-213ENST00000460048 TMPRSS4Q9NRS4 437 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 PAXBP1Q9Y5B6 917 aa16.99■□□□□ 0.31
SHANK2-213ENST00000460048 TARSL2A2RTX5 802 aaKnown RBP16.98■□□□□ 0.31
SHANK2-213ENST00000460048 C4orf47A7E2U8 309 aa16.98■□□□□ 0.31
SHANK2-213ENST00000460048 TTC34A8MYJ7 566 aa16.98■□□□□ 0.31
SHANK2-213ENST00000460048 SIN3BO75182 1162 aa16.98■□□□□ 0.31
SHANK2-213ENST00000460048 CLDN11O75508 207 aa16.98■□□□□ 0.31
SHANK2-213ENST00000460048 RDXP35241 583 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms