RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 HAPLN2Q9GZV7 340 aa8.39□□□□□ -1.07
NCSTN-209ENST00000459963 NACA2Q9H009 215 aa8.39□□□□□ -1.07
NCSTN-209ENST00000459963 ORC3Q9UBD5 711 aaPredicted RBP8.39□□□□□ -1.07
NCSTN-209ENST00000459963 KCND3Q9UK17 655 aa8.39□□□□□ -1.07
NCSTN-209ENST00000459963 PCDHA12Q9UN75 941 aa8.39□□□□□ -1.07
NCSTN-209ENST00000459963 L1RE1Q9UN81 338 aa8.39□□□□□ -1.07
NCSTN-209ENST00000459963 PLA2G4CQ9UP65 541 aa8.39□□□□□ -1.07
NCSTN-209ENST00000459963 DMTF1Q9Y222 760 aa8.39□□□□□ -1.07
NCSTN-209ENST00000459963 RBM8AQ9Y5S9 174 aaKnown RBP8.39□□□□□ -1.07
NCSTN-209ENST00000459963 DOCK9Q9BZ29 2069 aa8.39□□□□□ -1.07
NCSTN-209ENST00000459963 TBC1D3DA0A087WVF3 549 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 TBC1D3IA0A087WXS9 549 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 TBC1D3EA0A087X179 549 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 TBC1D3KA0A087X1G2 549 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 TBC1D3FA6NER0 549 aaPredicted RBP8.38□□□□□ -1.07
NCSTN-209ENST00000459963 TBC1D3LB9A6J9 549 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 F8VP50 259 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 AGRPO00253 132 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 PRICKLE3O43900 615 aaPredicted RBP8.38□□□□□ -1.07
NCSTN-209ENST00000459963 PDGFAP04085 211 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 TBC1D3HP0C7X1 549 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 CAPN3P20807 821 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 GUCY2CP25092 1073 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 YWHAQP27348 245 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 PCSK1P29120 753 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 MAT2AP31153 395 aaKnown RBP8.38□□□□□ -1.07
NCSTN-209ENST00000459963 NUDT1P36639 197 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 EHHADHQ08426 723 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 ZRSR2Q15696 482 aaKnown RBP8.38□□□□□ -1.07
NCSTN-209ENST00000459963 KYAT1Q16773 422 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 NADK2Q4G0N4 442 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 TBC1D3GQ6DHY5 549 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 TBC1D3CQ6IPX1 549 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 OSTM1Q86WC4 334 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 CD302Q8IX05 232 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 TBC1D3Q8IZP1 549 aaPredicted RBP8.38□□□□□ -1.07
NCSTN-209ENST00000459963 TMEM86AQ8N2M4 240 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 ZNF548Q8NEK5 533 aaPredicted RBP8.38□□□□□ -1.07
NCSTN-209ENST00000459963 FBXO32Q969P5 355 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 C8orf48Q96LL4 319 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 GFM1Q96RP9 751 aaKnown RBP8.38□□□□□ -1.07
NCSTN-209ENST00000459963 OSBPL3Q9H4L5 887 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 GSX1Q9H4S2 264 aaPredicted RBP8.38□□□□□ -1.07
NCSTN-209ENST00000459963 KMT5AQ9NQR1 393 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 DPP3Q9NY33 737 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 RRN3Q9NYV6 651 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 CHORDC1Q9UHD1 332 aaPredicted RBP8.38□□□□□ -1.07
NCSTN-209ENST00000459963 CLEC4EQ9ULY5 219 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 CA5BQ9Y2D0 317 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 DERAQ9Y315 318 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 RBM19Q9Y4C8 960 aaKnown RBP8.38□□□□□ -1.07
NCSTN-209ENST00000459963 KCTD3Q9Y597 815 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 KCNMB2Q9Y691 235 aa8.38□□□□□ -1.07
NCSTN-209ENST00000459963 FN1P02751 2386 aaKnown RBP8.37□□□□□ -1.07
NCSTN-209ENST00000459963 PRAMEF26H0Y7S4 382 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 FAM189A1O60320 539 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 HUS1O60921 280 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 RNASEH1O60930 286 aaKnown RBP8.37□□□□□ -1.07
NCSTN-209ENST00000459963 ATP2C2O75185 946 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 CBX6O95503 412 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 NOS2P35228 1153 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 LHX1P48742 406 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 COPB1P53618 953 aaKnown RBP8.37□□□□□ -1.07
NCSTN-209ENST00000459963 HNRNPKP61978 463 aaKnown RBP eCLIP8.37□□□□□ -1.07
NCSTN-209ENST00000459963 CYP27A1Q02318 531 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 GOLGA8FQ08AF8 430 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 GOLGA8DPQ0D2H9 430 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 STRN3Q13033 797 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 CST6Q15828 149 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 C14orf28Q4W4Y0 310 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 ZPBP2Q6X784 338 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 SND1Q7KZF4 910 aaKnown RBP eCLIP8.37□□□□□ -1.075e-7■■■■□ 19.7
NCSTN-209ENST00000459963 CATSPER3Q86XQ3 398 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 PRIMA1Q86XR5 153 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 PTPRN2Q92932 1015 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 IFT43Q96FT9 208 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 PPP1R13BQ96KQ4 1090 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 ZNF560Q96MR9 790 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 NAP1L4Q99733 375 aaKnown RBP8.37□□□□□ -1.07
NCSTN-209ENST00000459963 CMKLR1Q99788 373 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 RNF26Q9BY78 433 aaPredicted RBP8.37□□□□□ -1.07
NCSTN-209ENST00000459963 LNPKQ9C0E8 428 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 CYP4F12Q9HCS2 524 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 TUFT1Q9NNX1 390 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 STK17AQ9UEE5 414 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 SUN2Q9UH99 717 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 CYTH4Q9UIA0 394 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 GGT7Q9UJ14 662 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 NAP1L2Q9ULW6 460 aaPredicted RBP8.37□□□□□ -1.07
NCSTN-209ENST00000459963 CSNK1G3Q9Y6M4 447 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 RP1P56715 2156 aa8.37□□□□□ -1.07
NCSTN-209ENST00000459963 TACC2O95359 2948 aa8.36□□□□□ -1.07
NCSTN-209ENST00000459963 FAM221AA4D161 298 aa8.36□□□□□ -1.07
NCSTN-209ENST00000459963 GABRDO14764 452 aa8.36□□□□□ -1.07
NCSTN-209ENST00000459963 MED24O75448 989 aa8.36□□□□□ -1.07
NCSTN-209ENST00000459963 GOT1P17174 413 aa8.36□□□□□ -1.07
NCSTN-209ENST00000459963 UGT1A3P35503 534 aa8.36□□□□□ -1.07
NCSTN-209ENST00000459963 PNPLA4P41247 253 aa8.36□□□□□ -1.07
NCSTN-209ENST00000459963 PSMC1P62191 440 aaKnown RBP8.36□□□□□ -1.07
NCSTN-209ENST00000459963 PDE4CQ08493 712 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms