RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 ACRP10323 421 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 SOX11P35716 441 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 NUMBP49757 651 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 ZNF235Q14590 738 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 KIF19Q2TAC6 998 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 PTPN20Q4JDL3 420 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 PIWIL2Q8TC59 973 aaKnown RBP16.7■□□□□ 0.26
LSS-205ENST00000457828 DTNBP1Q96EV8 351 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 SERAC1Q96JX3 654 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 ZIC5Q96T25 663 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 GIT1Q9Y2X7 761 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 SIGLEC16A6NMB1 481 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 SPRP35270 261 aaPredicted RBP16.7■□□□□ 0.26
LSS-205ENST00000457828 PTP4A2Q12974 167 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 USP10Q14694 798 aaKnown RBP16.7■□□□□ 0.26
LSS-205ENST00000457828 WDR60Q8WVS4 1066 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 ZNF516Q92618 1163 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 MAN1C1Q9NR34 630 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 LRCH4O75427 683 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 TMEM63AO94886 807 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 CPA3P15088 417 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 AVPR1AP37288 418 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 RAD51Q06609 339 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 TRIM32Q13049 653 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 TSTA3Q13630 321 aaPredicted RBP16.7■□□□□ 0.26
LSS-205ENST00000457828 LPCAT4Q643R3 524 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 LRRC8EQ6NSJ5 796 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 CAAP1Q9H8G2 361 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 ARVCFO00192 962 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 C4BPAP04003 597 aaKnown RBP16.7■□□□□ 0.26
LSS-205ENST00000457828 SYN1P17600 705 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 IVDP26440 423 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 BST2Q10589 180 aaKnown RBP16.7■□□□□ 0.26
LSS-205ENST00000457828 C1orf220Q5T0J3 134 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 ARHGAP22Q7Z5H3 698 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 FAM131BQ86XD5 332 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 EDEM1Q92611 657 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 ZNF333Q96JL9 665 aa16.7■□□□□ 0.26
LSS-205ENST00000457828 UNKQ9C0B0 810 aaKnown RBP16.7■□□□□ 0.26
LSS-205ENST00000457828 ITGBL1O95965 494 aaPredicted RBP16.69■□□□□ 0.26
LSS-205ENST00000457828 BRCC3P46736 316 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 NOVP48745 357 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 TAF5Q15542 800 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 IL31Q6EBC2 164 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 TRIM67Q6ZTA4 783 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 MPP4Q96JB8 637 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 WDCPQ9H6R7 721 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 MRPL17Q9NRX2 175 aaKnown RBP16.69■□□□□ 0.26
LSS-205ENST00000457828 SMPD4Q9NXE4 827 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 PRKAG3Q9UGI9 489 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 DPP7Q9UHL4 492 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 AURKCQ9UQB9 309 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 SF3B1O75533 1304 aaKnown RBP eCLIP16.69■□□□□ 0.261e-6■■■■■ 118.4
LSS-205ENST00000457828 TCRBV7S3A2A0A539 114 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 SDR42E2A6NKP2 422 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 E5RJQ4 531 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 NET1Q7Z628 596 aaPredicted RBP16.69■□□□□ 0.26
LSS-205ENST00000457828 OR6Y1Q8NGX8 325 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 GIPC2Q8TF65 315 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 DDX1Q92499 740 aaKnown RBP16.69■□□□□ 0.26
LSS-205ENST00000457828 C18orf25Q96B23 403 aaPredicted RBP16.69■□□□□ 0.26
LSS-205ENST00000457828 SYT11Q9BT88 431 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 EMILIN2Q9BXX0 1053 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 EIF2AQ9BY44 585 aaKnown RBP16.69■□□□□ 0.26
LSS-205ENST00000457828 SLC28A3Q9HAS3 691 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 MICAL2O94851 1124 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 CYP2F1P24903 491 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 TMEM259Q4ZIN3 620 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 SCUBE3Q8IX30 993 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 NETO2Q8NC67 525 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 USP33Q8TEY7 942 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 TFB1MQ8WVM0 346 aaKnown RBP16.69■□□□□ 0.26
LSS-205ENST00000457828 SLC44A1Q8WWI5 657 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 RPRD1AQ96P16 312 aaPredicted RBP16.69■□□□□ 0.26
LSS-205ENST00000457828 CCT7Q99832 543 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 ST6GALNAC4Q9H4F1 302 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 ZNF395Q9H8N7 513 aaPredicted RBP16.69■□□□□ 0.26
LSS-205ENST00000457828 GTF2IRD1Q9UHL9 959 aa16.69■□□□□ 0.26
LSS-205ENST00000457828 EEF2KO00418 725 aaKnown RBP16.68■□□□□ 0.26
LSS-205ENST00000457828 NFKBIAP25963 317 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 C16orf89Q6UX73 402 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 BANPQ8N9N5 519 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 IFT43Q96FT9 208 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 C11orf49Q9H6J7 331 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 NENFQ9UMX5 172 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 COL2A1P02458 1487 aaPredicted RBP16.68■□□□□ 0.26
LSS-205ENST00000457828 SMIM28A0A1B0GU29 152 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 SLC12A8A0AV02 714 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 TSPAN1O60635 241 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 MSS51Q4VC12 460 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 DDX53Q86TM3 631 aaKnown RBP16.68■□□□□ 0.26
LSS-205ENST00000457828 LCA5Q86VQ0 697 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 FAM192AQ9GZU8 254 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 MUC3BQ9H195 1237 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 ETNK2Q9NVF9 386 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 DCDC2Q9UHG0 476 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 Q9Y3F1 56 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 MYH11P35749 1972 aa16.68■□□□□ 0.26
LSS-205ENST00000457828 SUPT3HO75486 399 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms