RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 IGDCC3Q8IVU1 814 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 CDKL3Q8IVW4 592 aaPredicted RBP13.65□□□□□ -0.22
LINC00343-203ENST00000454555 WDR75Q8IWA0 830 aaKnown RBP13.65□□□□□ -0.22
LINC00343-203ENST00000454555 LRRC43Q8N309 656 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 GALNT15Q8N3T1 639 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 GSDMBQ8TAX9 411 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 HSPH1Q92598 858 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 GATA6Q92908 595 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 SYT15Q9BQS2 421 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 ZBED2Q9BTP6 218 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 PRO3102Q9H379 93 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 PRDM16Q9HAZ2 1276 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 USP29Q9HBJ7 922 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 XAB2Q9HCS7 855 aaKnown RBP13.65□□□□□ -0.22
LINC00343-203ENST00000454555 PAPOLBQ9NRJ5 636 aaKnown RBP13.65□□□□□ -0.22
LINC00343-203ENST00000454555 RAB6BQ9NRW1 208 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 DPP3Q9NY33 737 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 DLGAP2Q9P1A6 1054 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 RALGAPA2Q2PPJ7 1873 aa13.65□□□□□ -0.22
LINC00343-203ENST00000454555 FAM159BA6NKW6 160 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 APOL1O14791 398 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 DDHD2O94830 711 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 KLHL2O95198 593 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 ZBED1O96006 694 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 CD48P09326 243 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 PEX19P40855 299 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 MAGEA3P43357 314 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 SESN3P58005 492 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 IRX4P78413 519 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 SARNPP82979 210 aaKnown RBP13.64□□□□□ -0.23
LINC00343-203ENST00000454555 DSG1Q02413 1049 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 SOX4Q06945 474 aaPredicted RBP13.64□□□□□ -0.23
LINC00343-203ENST00000454555 BST1Q10588 318 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 THOC5Q13769 683 aaKnown RBP13.64□□□□□ -0.23
LINC00343-203ENST00000454555 ZC3H18Q86VM9 953 aaKnown RBP13.64□□□□□ -0.23
LINC00343-203ENST00000454555 ZNF280BQ86YH2 543 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 MYLK4Q86YV6 388 aaPredicted RBP13.64□□□□□ -0.23
LINC00343-203ENST00000454555 CCNJLQ8IV13 435 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 CTAGE3PQ8IX95 158 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 COLGALT2Q8IYK4 626 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 PPM1NQ8N819 430 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 CXorf38Q8TB03 319 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 JADE3Q92613 823 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 C18orf25Q96B23 403 aaPredicted RBP13.64□□□□□ -0.23
LINC00343-203ENST00000454555 TMEM176AQ96HP8 235 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 FAM161BQ96MY7 647 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 UROC1Q96N76 676 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 YME1L1Q96TA2 773 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 ZNF670Q9BS34 389 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 ARHGEF4Q9NR80 690 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 TUBGCP4Q9UGJ1 667 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 CYTH4Q9UIA0 394 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 ITGA11Q9UKX5 1188 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 PLA2G4CQ9UP65 541 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 ANK1P16157 1881 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 COL4A6Q14031 1691 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 CITO14578 2027 aa13.64□□□□□ -0.23
LINC00343-203ENST00000454555 FAM237BA0A1B0GVD1 139 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 C2CD4BA6NLJ0 364 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 MDM4O15151 490 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 CILPO75339 1184 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 RFPL1O75677 317 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 MICAL2O94851 1124 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 STAU1O95793 577 aaKnown RBP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 BPGMP07738 259 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 CRABP2P29373 138 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 RPL9P32969 192 aaKnown RBP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 BTG3Q14201 252 aaPredicted RBP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 KRT81Q14533 505 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 SLC9A4Q6AI14 798 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 SCARA5Q6ZMJ2 495 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 C1orf127Q8N9H9 656 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 WDR60Q8WVS4 1066 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 NRG4Q8WWG1 115 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 FAM193BQ96PV7 902 aaPredicted RBP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 TMEM175Q9BSA9 504 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 CCDC106Q9BWC9 280 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 ADAM33Q9BZ11 813 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 NRDE2Q9H7Z3 1164 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 ETNK2Q9NVF9 386 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 NDE1Q9NXR1 346 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 PPARGC1AQ9UBK2 798 aaKnown RBP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 PCSK1NQ9UHG2 260 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 SOX13Q9UN79 622 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 HBS1LQ9Y450 684 aaKnown RBP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 H3BRJ5 948 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 PIRO00625 290 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 ANPEPP15144 967 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 GPD2P43304 727 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 NR2C2P49116 596 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 MRPS5P82675 430 aaKnown RBP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 RBP5P82980 135 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 STX3Q13277 289 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 CHI3L2Q15782 390 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 PAN2Q504Q3 1202 aaKnown RBP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 FAM102AQ5T9C2 384 aaPredicted RBP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 AP1ARQ63HQ0 302 aa13.63□□□□□ -0.23
LINC00343-203ENST00000454555 CWF19L1Q69YN2 538 aaKnown RBP13.63□□□□□ -0.23
LINC00343-203ENST00000454555 ARID3BQ8IVW6 561 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms