RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 TMEM159Q96B96 161 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 CATSPER2Q96P56 530 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 ACO2Q99798 780 aaKnown RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 GDF3Q9NR23 364 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 UBA2Q9UBT2 640 aaPredicted RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 SEPT3Q9UH03 358 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 CRYL1Q9Y2S2 319 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 IPPQ9Y573 584 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 RIC1Q4ADV7 1423 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 USP54Q70EL1 1684 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 PHGDHO43175 533 aaKnown RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 B4GALT5O43286 388 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 RASSF9O75901 435 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 ZNF682O95780 498 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 ERVK-10P10266 1014 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 PCNAP12004 261 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 SKIV2L2P42285 1042 aaKnown RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 MARCKSL1P49006 195 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 PCYT1AP49585 367 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 INHBEP58166 350 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 FMO1Q01740 532 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 CSTF3Q12996 717 aaKnown RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 ITGB3BPQ13352 177 aaPredicted RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 SHROOM1Q2M3G4 852 aaPredicted RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 SPANXN3Q5MJ09 141 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 TATDN1Q6P1N9 297 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 ZBTB49Q6ZSB9 765 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 C16orf59Q7L2K0 433 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 CACUL1Q86Y37 369 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 PALB2Q86YC2 1186 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 ZNF75CPQ92670 426 aaPredicted RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 CASP10Q92851 521 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 LRRC39Q96DD0 335 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 FAM120BQ96EK7 910 aaKnown RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 APOPT1Q96IL0 206 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 ABCC13Q9NSE7 274 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 SH3BP4Q9P0V3 963 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 POLG2Q9UHN1 485 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 SPACA6W5XKT8 324 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 BUD23O43709 281 aaKnown RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 NPM3O75607 178 aaKnown RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 HOXC6P09630 235 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 SMIM10L2AP0DMW4 78 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 SMIM10L2BP0DMW5 78 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 ATP6V1B2P21281 511 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 CRABP2P29373 138 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 CHI3L1P36222 383 aaPredicted RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 ATP5C1P36542 298 aaKnown RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 MMP13P45452 471 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 ZNF143P52747 638 aaPredicted RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 CRADDP78560 199 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 SFSWAPQ12872 951 aaKnown RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 PARP6Q2NL67 630 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 CCDC153Q494R4 210 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 SLC45A4Q5BKX6 768 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 ARSHQ5FYA8 562 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 MFSD4BQ5TF39 518 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 IYDQ6PHW0 289 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 NPNTQ6UXI9 565 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 PLPPR4Q7Z2D5 763 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 GLT6D1Q7Z4J2 308 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 PRELID2Q8N945 189 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 TRPM4Q8TD43 1214 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 LENG9Q96B70 501 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 TADA1Q96BN2 335 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 SH3GL1Q99961 368 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 SNRNP25Q9BV90 132 aaKnown RBP6.72□□□□□ -1.33
HCG18-239ENST00000454129 DPY30Q9C005 99 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 IKZF4Q9H2S9 585 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 PRDM12Q9H4Q4 367 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 NMRAL1Q9HBL8 299 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 MID1IP1Q9NPA3 183 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 ARMCX1Q9P291 453 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 TMCC3Q9ULS5 477 aa6.72□□□□□ -1.33
HCG18-239ENST00000454129 TMEM114B3SHH9 223 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 IFRD1O00458 451 aaPredicted RBP6.71□□□□□ -1.33
HCG18-239ENST00000454129 TRDMT1O14717 391 aaKnown RBP6.71□□□□□ -1.33
HCG18-239ENST00000454129 ARHGEF9O43307 516 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 DCXO43602 365 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 SNUPNO95149 360 aaKnown RBP6.71□□□□□ -1.33
HCG18-239ENST00000454129 CYP1A1P04798 512 aaPredicted RBP6.71□□□□□ -1.33
HCG18-239ENST00000454129 MSH3P20585 1137 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 CDK16Q00536 496 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 DSG1Q02413 1049 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 BCL2L1Q07817 233 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 ECM1Q16610 540 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 UGCGQ16739 394 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 CRY2Q49AN0 593 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 LRRC38Q5VT99 294 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 RD3Q7Z3Z2 195 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 TMPRSS6Q8IU80 811 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 CENPLQ8N0S6 344 aaPredicted RBP6.71□□□□□ -1.33
HCG18-239ENST00000454129 TMCO5AQ8N6Q1 288 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 C12orf29Q8N999 325 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 ANKRD52Q8NB46 1076 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 OR52K1Q8NGK4 314 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 ZMAT2Q96NC0 199 aaKnown RBP6.71□□□□□ -1.33
HCG18-239ENST00000454129 CPNE1Q99829 537 aa6.71□□□□□ -1.33
HCG18-239ENST00000454129 SENP6Q9GZR1 1112 aaPredicted RBP6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms