RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 PSPC1Q8WXF1 523 aaKnown RBP5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 PGBD1Q96JS3 809 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 SLC6A18Q96N87 628 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 SPZ1Q9BXG8 430 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 OSBPL2Q9H1P3 480 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 RNF41Q9H4P4 317 aaPredicted RBP5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 TMEM206Q9H813 350 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 ERVMER34-1Q9H9K5 563 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 EBF2Q9HAK2 575 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 PRDM8Q9NQV8 689 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 DLL4Q9NR61 685 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 PRR13Q9NZ81 148 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 SEL1LQ9UBV2 794 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 RPH3AQ9Y2J0 694 aaPredicted RBP5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 OBSL1O75147 1896 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 PRRT4C9JH25 899 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 M0QZQ0 153 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 KLF4O43474 513 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 LIPCP11150 499 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 ACSL1P33121 698 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 QARSP47897 775 aaKnown RBP5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 CLCN7P51798 805 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 ZNF143P52747 638 aaPredicted RBP5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 PDX1P52945 283 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 NPEPPSP55786 919 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 SLC7A5Q01650 507 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 NCBP1Q09161 790 aaKnown RBP5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 RESTQ13127 1097 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 ENPP2Q13822 863 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 LACTB2Q53H82 288 aaPredicted RBP5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 GLRA4Q5JXX5 417 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 FILIP1Q7Z7B0 1213 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 MFSD4AQ8N468 514 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 APPL2Q8NEU8 664 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 WDR36Q8NI36 951 aaKnown RBP5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 MISP3Q96FF7 219 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 ZMAT2Q96NC0 199 aaKnown RBP5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 GCNAQ96QF7 691 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 JPH2Q9BR39 696 aaPredicted RBP5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 NFKBIZQ9BYH8 718 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 TRIM55Q9BYV6 548 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 SIRPGQ9P1W8 387 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 ARHGAP26Q9UNA1 814 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 SLC5A6Q9Y289 635 aa5.63□□□□□ -1.51
SBDSP1-204ENST00000453858 CKAP5Q14008 2032 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 PRKDCP78527 4128 aaKnown RBP5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 OR6C75A6NL08 312 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 INO80B-WBP1J3KQ70 363 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 PODXLO00592 558 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 CASC3O15234 703 aaKnown RBP5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 NVLO15381 856 aaKnown RBP5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 TULP3O75386 442 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 FOSP01100 380 aaPredicted RBP5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 IGHV4-34P06331 123 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 CEACAM5P06731 702 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 TUFMP49411 452 aaKnown RBP5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 COPAP53621 1224 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 LTBQ06643 244 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 MYBPC2Q14324 1141 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 TCEAL1Q15170 157 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 IFI16Q16666 785 aaKnown RBP5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 MANEAQ5SRI9 462 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 PLA2G4FQ68DD2 849 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 GDF7Q7Z4P5 450 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 THAP5Q7Z6K1 395 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 SPATS2Q86XZ4 545 aaKnown RBP5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 TMPRSS6Q8IU80 811 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 NOSTRINQ8IVI9 506 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 TEX2Q8IWB9 1127 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 TP53INP2Q8IXH6 220 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 CHPFQ8IZ52 775 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 TERB1Q8NA31 727 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 RRP36Q96EU6 259 aaKnown RBP5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 ACE2Q9BYF1 805 aaPredicted RBP5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 ANO3Q9BYT9 981 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 TRIM8Q9BZR9 551 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 TNKS2Q9H2K2 1166 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 TRIT1Q9H3H1 467 aaKnown RBP5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 CAPN6Q9Y6Q1 641 aa5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 TP53BP1Q12888 1972 aaPredicted RBP5.62□□□□□ -1.51
SBDSP1-204ENST00000453858 C2orf78A6NCI8 922 aa5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 SMARCA5O60264 1052 aaPredicted RBP5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 JAK2O60674 1132 aa5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 CBX7O95931 251 aa5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 NR1D1P20393 614 aa5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 POLR2BP30876 1174 aaKnown RBP5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 SFNP31947 248 aa5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 RPL9P32969 192 aaKnown RBP5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 PTGER4P35408 488 aa5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 ARRB1P49407 418 aaPredicted RBP5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 AARSP49588 968 aaKnown RBP eCLIP5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 C21orf59P57076 290 aa5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 ATP2C1P98194 919 aaPredicted RBP5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 C10orf76Q5T2E6 689 aa5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 JAKMIP3Q5VZ66 844 aa5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 CYB5R4Q7L1T6 521 aa5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 SHISA5Q8N114 240 aa5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 SRBD1Q8N5C6 995 aaKnown RBP5.61□□□□□ -1.51
SBDSP1-204ENST00000453858 TEX19Q8NA77 164 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms