RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 CDH6P55285 790 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 OXCT1P55809 520 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 TPI1P60174 286 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 NRG1Q02297 640 aaPredicted RBP11.94□□□□□ -0.5
LINC00408-201ENST00000447784 ZNF177Q13360 481 aaPredicted RBP11.94□□□□□ -0.5
LINC00408-201ENST00000447784 CDH18Q13634 790 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 NUDT18Q6ZVK8 323 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 C14orf80Q86SX3 495 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 ALYREFQ86V81 257 aaKnown RBP11.94□□□□□ -0.5
LINC00408-201ENST00000447784 CFAP52Q8N1V2 620 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 PYROXD2Q8N2H3 581 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 SYNPOQ8N3V7 929 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 CARNMT1Q8N4J0 409 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 LRRC57Q8N9N7 239 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 PHOX2BQ99453 314 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 CALN1Q9BXU9 219 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 MAK16Q9BXY0 300 aaKnown RBP11.94□□□□□ -0.5
LINC00408-201ENST00000447784 SEMA4AQ9H3S1 761 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 CATSPERBQ9H7T0 1116 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 PLK2Q9NYY3 685 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 DEC1Q9P2X7 70 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 PPARGC1AQ9UBK2 798 aaKnown RBP11.94□□□□□ -0.5
LINC00408-201ENST00000447784 CAPN6Q9Y6Q1 641 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 MUC6Q6W4X9 2439 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 A0A1B0GVM2 712 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 TCAF2A6NFQ2 919 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 OTOL1A6NHN0 477 aaPredicted RBP11.93□□□□□ -0.5
LINC00408-201ENST00000447784 DRGXA6NNA5 263 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 I6L893 689 aaPredicted RBP11.93□□□□□ -0.5
LINC00408-201ENST00000447784 FGF10O15520 208 aaPredicted RBP11.93□□□□□ -0.5
LINC00408-201ENST00000447784 CLDN11O75508 207 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 LRIG2O94898 1065 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 ZRANB2O95218 330 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC00408-201ENST00000447784 FTCDO95954 541 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 PENKP01210 267 aaPredicted RBP11.93□□□□□ -0.5
LINC00408-201ENST00000447784 RHOQP17081 205 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 GJA4P35212 333 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 CDH4P55283 916 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 RWDD2BP57060 319 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 RPS24P62847 133 aaKnown RBP11.93□□□□□ -0.5
LINC00408-201ENST00000447784 MTAPQ13126 283 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 CCINQ13939 588 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 DPYSL2Q16555 572 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 CA9Q16790 459 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 TMEM196Q5HYL7 178 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 ZC3H14Q6PJT7 736 aaKnown RBP11.93□□□□□ -0.5
LINC00408-201ENST00000447784 CPNE8Q86YQ8 564 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 MFN1Q8IWA4 741 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 REXO1L1PQ8IX06 675 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 NAT16Q8N8M0 369 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 IGSF8Q969P0 613 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 PRICKLE1Q96MT3 831 aaPredicted RBP11.93□□□□□ -0.5
LINC00408-201ENST00000447784 SLC2A11Q9BYW1 496 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 RETREG1Q9H6L5 497 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 PRMT8Q9NR22 394 aaPredicted RBP11.93□□□□□ -0.5
LINC00408-201ENST00000447784 DNAJC17Q9NVM6 304 aaKnown RBP11.93□□□□□ -0.5
LINC00408-201ENST00000447784 KLHL11Q9NVR0 708 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 COL4A2P08572 1712 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 COL4A3Q01955 1670 aa11.93□□□□□ -0.5
LINC00408-201ENST00000447784 PTPRDP23468 1912 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 NUP210Q8TEM1 1887 aaPredicted RBP11.92□□□□□ -0.5
LINC00408-201ENST00000447784 FAM72CH0Y354 149 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 CACNG3O60359 315 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 LUC7L3O95232 432 aaKnown RBP11.92□□□□□ -0.5
LINC00408-201ENST00000447784 DRD1P21728 446 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 OR1E1P30953 314 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 CTNNA1P35221 906 aaKnown RBP11.92□□□□□ -0.5
LINC00408-201ENST00000447784 EIF2DP41214 584 aaKnown RBP11.92□□□□□ -0.5
LINC00408-201ENST00000447784 HCAR3P49019 387 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 DGKGP49619 791 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 CCR3P51677 355 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 GRSF1Q12849 480 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00408-201ENST00000447784 PON2Q15165 354 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 RPS6KA1Q15418 735 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 ATP13A4Q4VNC1 1196 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 ZNF569Q5MCW4 686 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 C6orf118Q5T5N4 469 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 FAM72AQ5TYM5 149 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 FYB2Q5VWT5 728 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 TXNRD3NBQ6F5E7 133 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 GRAMD4Q6IC98 578 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 FAM72DQ6L9T8 149 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 RFX8Q6ZV50 586 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 CHST9Q7L1S5 443 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 TFAP2DQ7Z6R9 452 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 NT5DC3Q86UY8 548 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 FAM72BQ86X60 149 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 CCDC50Q8IVM0 306 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 KATNAL2Q8IYT4 538 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 RCOR2Q8IZ40 523 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 SPEM1Q8N4L4 309 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.92□□□□□ -0.5
LINC00408-201ENST00000447784 NELL1Q92832 810 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
LINC00408-201ENST00000447784 CHFRQ96EP1 664 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 RBM41Q96IZ5 413 aaKnown RBP11.92□□□□□ -0.5
LINC00408-201ENST00000447784 KCTD15Q96SI1 283 aaPredicted RBP11.92□□□□□ -0.5
LINC00408-201ENST00000447784 PNKPQ96T60 521 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 P2RY13Q9BPV8 354 aa11.92□□□□□ -0.5
LINC00408-201ENST00000447784 FAM126AQ9BYI3 521 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms