RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CTAGE9A4FU28 777 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 TCAF2A6NFQ2 919 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 HOXC11O43248 304 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 RHOQP17081 205 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 CASQ1P31415 396 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 HTR7P34969 479 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 HCAR3P49019 387 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 ZNF135P52742 658 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 CDH4P55283 916 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 GAD2Q05329 585 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 TAZQ16635 292 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 TTC39BQ5VTQ0 682 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 NAIF1Q69YI7 327 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 NLRP14Q86W24 1093 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 C12orf40Q86WS4 652 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 PQLC3Q8N755 202 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 UBE2Q2Q8WVN8 375 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 RNF157Q96PX1 679 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 CATSPERBQ9H7T0 1116 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 CD320Q9NPF0 282 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 ZNF212Q9UDV6 495 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 SNX12Q9UMY4 172 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 MYO18AQ92614 2054 aaKnown RBP18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 ESPNB1AK53 854 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 H0Y626 953 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 DCLK1O15075 740 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 TRIM24O15164 1050 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 FGF10O15520 208 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 LUC7L3O95232 432 aaKnown RBP18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 GJA4P35212 333 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 NUMBP49757 651 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 DYNLT1P63172 113 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 ADCY2Q08462 1091 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 NR1H3Q13133 447 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 TFDP3Q5H9I0 405 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 IER5LQ5T953 404 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 SEL1L2Q5TEA6 688 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 RNF43Q68DV7 783 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 ASTLQ6HA08 431 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 CHST9Q7L1S5 443 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 RNF135Q8IUD6 432 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 RTL3Q8N8U3 475 aaKnown RBP18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 OR52K2Q8NGK3 314 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 OSBPL9Q96SU4 736 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 MAK16Q9BXY0 300 aaKnown RBP18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 OSBPL8Q9BZF1 889 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 TMEM248Q9NWD8 314 aa18.5■□□□□ 0.55
TRAPPC4-203ENST00000447216 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 WASH4PA8MWX3 477 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 ZNF487B1APH4 448 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 CEP104O60308 925 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 CLDN11O75508 207 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 SRFP11831 508 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 SLC6A11P48066 632 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 COPS2P61201 443 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 ZNF177Q13360 481 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 PPP2R5EQ16537 467 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 FSCBQ5H9T9 825 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 MPP7Q5T2T1 576 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 NCBP2-AS2Q69YL0 99 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 CXorf57Q6NSI4 855 aaKnown RBP18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 VSIG1Q86XK7 387 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 MFN1Q8IWA4 741 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 NPWQ8N729 165 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 COG1Q8WTW3 980 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 ZNF592Q92610 1267 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 CHFRQ96EP1 664 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 CARD9Q9H257 536 aa18.49■□□□□ 0.55
TRAPPC4-203ENST00000447216 TCRBV7S2A1N4TA0A589 114 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 APOL1O14791 398 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 ZNF185O15231 689 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 CACNG3O60359 315 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 CST8O60676 142 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 RHOCP08134 193 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 OR1E1P30953 314 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 PTPN7P35236 360 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 CETN2P41208 172 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 CDH18Q13634 790 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 PAPD7Q5XG87 772 aaKnown RBP18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 C1orf228Q6PIY5 440 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 TMCO3Q6UWJ1 677 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 NPNTQ6UXI9 565 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 TP53INP2Q8IXH6 220 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 ETFBKMTQ8IXQ9 262 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 GJD3Q8N144 294 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 CCDC33Q8N5R6 958 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 DNASE1L2Q92874 299 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 CELF6Q96J87 481 aaKnown RBP18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 MS4A14Q96JA4 679 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 KLC2Q9H0B6 622 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 SLC2A4RGQ9NR83 387 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 HEBP1Q9NRV9 189 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 DNAJC17Q9NVM6 304 aaKnown RBP18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 SMARCAL1Q9NZC9 954 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 DUSP12Q9UNI6 340 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 SORCS3Q9UPU3 1222 aa18.48■□□□□ 0.55
TRAPPC4-203ENST00000447216 MFSD11O43934 449 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 TULP3O75386 442 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms