RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RIC8BQ9NVN3 520 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 SPDYE16A6NNV3 312 aaPredicted RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 GLRBP48167 497 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 FUT2Q10981 343 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 KLHL12Q53G59 568 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 CACHD1Q5VU97 1274 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 XKR5Q6UX68 686 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 MRPL57Q9BQC6 102 aaKnown RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 SPAG4Q9NPE6 437 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 PADI4Q9UM07 663 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 IDO1P14902 403 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 SFNP31947 248 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 BNC1Q01954 994 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 BNIP3Q12983 259 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 MZT2BQ6NZ67 158 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 NKD2Q969F2 451 aaPredicted RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 VPS51Q9UID3 782 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 SOAT2O75908 522 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 BCAS2O75934 225 aaPredicted RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 IDH3AP50213 366 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 EFHD2Q96C19 240 aaPredicted RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 ULK4Q96C45 1275 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 TXLNGYQ9BZA5 131 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 PDZK1Q5T2W1 519 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 POTEHQ6S545 545 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 SNX19Q92543 992 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 CLEC4MQ9H2X3 399 aaPredicted RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 DFFAO00273 331 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 ZNF682O95780 498 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 GNA12Q03113 381 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 KCNA1Q09470 495 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 TJAP1Q5JTD0 557 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 CYP2U1Q7Z449 544 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 ANKS1BQ7Z6G8 1248 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 LINC00523Q86TU6 105 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 SERHL2Q9H4I8 314 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 SERHLQ9NQF3 203 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 LIMD1Q9UGP4 676 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 VANGL2Q9ULK5 521 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 OVOS2A0A0J9YW53 1432 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 OVOS2Q6IE36 1432 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 F5P12259 2224 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 TIPRLO75663 272 aa8.02□□□□□ -1.12
SMG1-202ENST00000446231 GPD1P21695 349 aa8.02□□□□□ -1.12
SMG1-202ENST00000446231 STT3AP46977 705 aa8.02□□□□□ -1.12
SMG1-202ENST00000446231 RBP5P82980 135 aa8.02□□□□□ -1.12
SMG1-202ENST00000446231 TSTA3Q13630 321 aaPredicted RBP8.02□□□□□ -1.12
SMG1-202ENST00000446231 PTCD3Q96EY7 689 aaKnown RBP8.02□□□□□ -1.12
SMG1-202ENST00000446231 UGT2B28Q9BY64 529 aa8.02□□□□□ -1.12
SMG1-202ENST00000446231 MTFR1LQ9H019 292 aa8.02□□□□□ -1.12
SMG1-202ENST00000446231 TPI1P60174 286 aa8.02□□□□□ -1.12
SMG1-202ENST00000446231 FAM8A1Q9UBU6 413 aa8.02□□□□□ -1.12
SMG1-202ENST00000446231 MT-CO1P00395 513 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 PTGER2P43116 358 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 SULT2A1Q06520 285 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 METTL21CQ5VZV1 264 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 RXFP2Q8WXD0 754 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 NUDT5Q9UKK9 219 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 LOC110117498-PIK3R3F6TDL0 507 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 RHOBTB1O94844 696 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 SERPINH1P50454 418 aaKnown RBP8.02□□□□□ -1.13
SMG1-202ENST00000446231 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMG1-202ENST00000446231 DNASE1L3Q13609 305 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 NFYCQ13952 458 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 BMT2Q1RMZ1 405 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 PYDC2Q56P42 97 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 MYO1HQ8N1T3 1032 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 CDH9Q9ULB4 789 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 SVILO95425 2214 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 H0YIN7 160 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 NAMPTP43490 491 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 ARSHQ5FYA8 562 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 C16orf86Q6ZW13 317 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 CCDC126Q96EE4 140 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 LRRC40Q9H9A6 602 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 RABL2AQ9UBK7 228 aaPredicted RBP8.02□□□□□ -1.13
SMG1-202ENST00000446231 UBA2Q9UBT2 640 aaPredicted RBP8.02□□□□□ -1.13
SMG1-202ENST00000446231 SPATA2Q9UM82 520 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 VEGFAP15692 232 aaPredicted RBP8.02□□□□□ -1.13
SMG1-202ENST00000446231 GNL1P36915 607 aaPredicted RBP8.02□□□□□ -1.13
SMG1-202ENST00000446231 POU4F1Q01851 419 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 GTF2H3Q13889 308 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 QPRTQ15274 297 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 SV2AQ7L0J3 742 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 ZDHHC13Q8IUH4 622 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 GRPEL2Q8TAA5 225 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 DMRTB1Q96MA1 342 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 AGRPO00253 132 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 NDUFB5O43674 189 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 P3H2Q8IVL5 708 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 RNF139Q8WU17 664 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 CPSF3Q9UKF6 684 aaKnown RBP8.02□□□□□ -1.13
SMG1-202ENST00000446231 EFCAB10A6NFE3 127 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 AVILO75366 819 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 FAR1Q8WVX9 515 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 SEC14L1Q92503 715 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 ZHX1-C8orf76Q96EF9 292 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 SPRTNQ9H040 489 aaPredicted RBP8.02□□□□□ -1.13
SMG1-202ENST00000446231 ADORA2BP29275 332 aa8.02□□□□□ -1.13
SMG1-202ENST00000446231 ARPP19P56211 112 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms