RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 HNRNPABQ99729 332 aaKnown RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 CORO1BQ9BR76 489 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 MTMR12Q9C0I1 747 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 WDR55Q9H6Y2 383 aaPredicted RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 TDRD3Q9H7E2 651 aaKnown RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 CLK4Q9HAZ1 481 aaKnown RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 FBXO40Q9UH90 709 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 SEPT9Q9UHD8 586 aaPredicted RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 SERPINA10Q9UK55 444 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 SLC8A2Q9UPR5 921 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 COQ6Q9Y2Z9 468 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 TMEM247A6NEH6 219 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 FAM155AB1AL88 458 aaPredicted RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 TMEM114B3SHH9 223 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 G3V2L1 256 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 G3V3G9 751 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 PSMD12O00232 456 aaPredicted RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 GCATO75600 419 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 CD19P15391 556 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 ZNF12P17014 697 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 GABRB3P28472 473 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 HMOX2P30519 316 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 HOXD12P35452 270 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 PPARGP37231 505 aaPredicted RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 ASPAP45381 313 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 ZNF143P52747 638 aaPredicted RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 HERC3Q15034 1050 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 STILQ15468 1287 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 LSM12Q3MHD2 195 aaKnown RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 ZBED5Q49AG3 693 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 DCAF8Q5TAQ9 597 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 SLC9A4Q6AI14 798 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 TRNP1Q6NT89 227 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 C4orf22Q6V702 233 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 GPR141Q7Z602 305 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 SETD3Q86TU7 594 aaPredicted RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 MCF2L2Q86YR7 1114 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 WDR49Q8IV35 697 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 BRSK2Q8IWQ3 736 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 CPNE9Q8IYJ1 553 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 TNS4Q8IZW8 715 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 MYO1HQ8N1T3 1032 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 PCDH19Q8TAB3 1148 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 ATP6V0A1Q93050 837 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 SLC29A1Q99808 456 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 DCUN1D5Q9BTE7 237 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 ANKRD60Q9BZ19 345 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 SEMA6AQ9H2E6 1030 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 HIPK3Q9H422 1215 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 TUT1Q9H6E5 874 aaKnown RBP10.26□□□□□ -0.77
CASP4-203ENST00000444739 DBNDD1Q9H9R9 158 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 SELENONQ9NZV5 590 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 DOLKQ9UPQ8 538 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 AFG3L2Q9Y4W6 797 aa10.26□□□□□ -0.77
CASP4-203ENST00000444739 E2F8A0AVK6 867 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 TESPA1A2RU30 521 aaPredicted RBP10.25□□□□□ -0.77
CASP4-203ENST00000444739 HTR3EA5X5Y0 456 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 TMX2-CTNND1H3BSU7 103 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 NEMP1O14524 444 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 FOXD2O60548 495 aaPredicted RBP10.25□□□□□ -0.77
CASP4-203ENST00000444739 ADAM23O75077 832 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 E2F6O75461 281 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 VAPBO95292 243 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 FUCA1P04066 466 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 INHBBP09529 407 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 TYK2P29597 1187 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 CAP2P40123 477 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 TNFSF9P41273 254 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 MAGEA12P43365 314 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 BCAP31P51572 246 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 AP3M2P53677 418 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 CRADDP78560 199 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 NAB1Q13506 487 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 SEMA5AQ13591 1074 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 C15orf59Q2T9L4 293 aaPredicted RBP10.25□□□□□ -0.77
CASP4-203ENST00000444739 ZNF829Q3KNS6 432 aaPredicted RBP10.25□□□□□ -0.77
CASP4-203ENST00000444739 FASTKD5Q7L8L6 764 aaKnown RBP10.25□□□□□ -0.77
CASP4-203ENST00000444739 PLD6Q8N2A8 252 aaKnown RBP10.25□□□□□ -0.77
CASP4-203ENST00000444739 FAM156AQ8NDB6 213 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 ADAM32Q8TC27 787 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 AGR3Q8TD06 166 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 LRTOMTQ8WZ04 291 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 CDKL2Q92772 493 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 CNPY3Q9BT09 278 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 BRD8Q9H0E9 1235 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 TUBA8Q9NY65 449 aaPredicted RBP10.25□□□□□ -0.77
CASP4-203ENST00000444739 CDC14AQ9UNH5 594 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 AP4S1Q9Y587 144 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 ANKRD31Q8N7Z5 1873 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.25□□□□□ -0.77
CASP4-203ENST00000444739 C9IYK1 514 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 K7ERI5 159 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 TRIM38O00635 465 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 HTRA2O43464 458 aaPredicted RBP10.25□□□□□ -0.77
CASP4-203ENST00000444739 MED7O43513 233 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 TADA2AO75478 443 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 CSPG5O95196 566 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 ATE1O95260 518 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 OCM2P0CE71 109 aa10.25□□□□□ -0.77
CASP4-203ENST00000444739 OCMP0CE72 109 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms