RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ASNA1O43681 348 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 PLAUP00749 431 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 FGF2P09038 288 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 HSPA1AP0DMV8 641 aaKnown RBP3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 HSPA1BP0DMV9 641 aaKnown RBP3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 MMP8P22894 467 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 HOXA7P31268 230 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 HALP42357 657 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 PLCD1P51178 756 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 RAE1P78406 368 aaKnown RBP3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 GALNT1Q10472 559 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 STIM1Q13586 685 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 BLMHQ13867 455 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 SPARCL1Q14515 664 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 KPNB1Q14974 876 aaKnown RBP3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 MAPKAPK3Q16644 382 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 P3H1Q32P28 736 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 SLC9C1Q4G0N8 1177 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 TMEM196Q5HYL7 178 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 CC2D1BQ5T0F9 858 aaKnown RBP3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 ACSM6Q6P461 480 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 TECPR1Q7Z6L1 1165 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 P3H2Q8IVL5 708 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 CCT6BQ92526 530 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 FCRL5Q96RD9 977 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 MYH16Q9H6N6 1097 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 SIRT4Q9Y6E7 314 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 SAMD9Q5K651 1589 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 NRKQ7Z2Y5 1582 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 MAST1Q9Y2H9 1570 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 DISP2A7MBM2 1401 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 NCOA3Q9Y6Q9 1424 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 CHD4Q14839 1912 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 MROH1Q8NDA8 1641 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 ADGRB2O60241 1585 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 SAMD9LQ8IVG5 1584 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 NPC1O15118 1278 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 INPPL1O15357 1258 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 CTIFO43310 598 aaKnown RBP3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 CSTBP04080 98 aaKnown RBP3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 CD63P08962 238 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 GYS1P13807 737 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 MATN1P21941 496 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 RPS6KB1P23443 525 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 IGHMBP2P38935 993 aaKnown RBP3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 SEMA3BQ13214 749 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 DHX8Q14562 1220 aaKnown RBP3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 PDCD2Q16342 344 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 ZACNQ401N2 412 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 RBM44Q6ZP01 1051 aaKnown RBP3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 PIK3AP1Q6ZUJ8 805 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 RFX6Q8HWS3 928 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 RASGRP3Q8IV61 690 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 ANKRD42Q8N9B4 389 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 MPLKIPQ8TAP9 179 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 GLMPQ8WWB7 406 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 ZNF845Q96IR2 970 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 PAAF1Q9BRP4 392 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 TRMOQ9BU70 441 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 CHMP4AQ9BY43 222 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 DACT1Q9NYF0 836 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 GRHPRQ9UBQ7 328 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 HEMK1Q9Y5R4 338 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 MORC2Q9Y6X9 1032 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 DLC1Q96QB1 1528 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 ARHGAP35Q9NRY4 1499 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 SPHKAPQ2M3C7 1700 aa3.78□□□□□ -1.8
HMGB3P12-201ENST00000438745 TMEM2Q9UHN6 1383 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 PLXNC1O60486 1568 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 SLIT1O75093 1534 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 CCDC187A0A096LP49 1063 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 hCG_1642624A0A1W2PR95 340 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 C2CD4BA6NLJ0 364 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 J3KTA2 159 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 M0QZQ0 153 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 DNPH1O43598 174 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 PIP5K1CO60331 668 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 SGPL1O95470 568 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 VIPP01282 170 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 DRD1P21728 446 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 KLRK1P26718 216 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 AKT1P31749 480 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 SOX2P48431 317 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 CCT4P50991 539 aaKnown RBP3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 LINC00205P59089 165 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 B4GALNT1Q00973 533 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 NSUN2Q08J23 767 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 CNGA3Q16281 694 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 TIGD6Q17RP2 521 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 CCDC144NLQ6NUI1 221 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 KYAT3Q6YP21 454 aaKnown RBP3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 ZNF517Q6ZMY9 492 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 ANKRD13BQ86YJ7 626 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 SMC5Q8IY18 1101 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 LAS2Q8IYD9 372 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 ARFGAP1Q8N6T3 406 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 OR52L2PQ8NGH6 319 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 FAM71BQ8TC56 605 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms