RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 OR1E1P30953 314 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 ACVRL1P37023 503 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 SOX9P48436 509 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 TRIP13Q15645 432 aaPredicted RBP13.83□□□□□ -0.2
PRPF39-202ENST00000424478 TAZQ16635 292 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 SFTPA1Q8IWL2 248 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 TMA16Q96EY4 203 aaKnown RBP13.83□□□□□ -0.2
PRPF39-202ENST00000424478 ZYG11BQ9C0D3 744 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 NOL6Q9H6R4 1146 aaKnown RBP13.83□□□□□ -0.2
PRPF39-202ENST00000424478 ZDHHC4Q9NPG8 344 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 GDE1Q9NZC3 331 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 DTLQ9NZJ0 730 aa13.83□□□□□ -0.2
PRPF39-202ENST00000424478 MYO18AQ92614 2054 aaKnown RBP13.83□□□□□ -0.2
PRPF39-202ENST00000424478 NYNRINQ9P2P1 1898 aaKnown RBP13.82□□□□□ -0.2
PRPF39-202ENST00000424478 PRLRP16471 622 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 AAK1Q2M2I8 961 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 RHBDF2Q6PJF5 856 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 TMCO3Q6UWJ1 677 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 C12orf40Q86WS4 652 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 ADGRG2Q8IZP9 1017 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 GLIS1Q8NBF1 620 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 SPATA4Q8NEY3 305 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 OR7D4Q8NG98 312 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 ACTRT1Q8TDG2 376 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 FAF2Q96CS3 445 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 KRT12Q99456 494 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 NCAPGQ9BPX3 1015 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 BBS2Q9BXC9 721 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 ETS1P14921 441 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 GDI1P31150 447 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 PAFAH1B1P43034 410 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 SYCP2LQ5T4T6 812 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 C1orf74Q96LT6 269 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 TMEM121Q9BTD3 319 aa13.82□□□□□ -0.2
PRPF39-202ENST00000424478 E2F8A0AVK6 867 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 TJP3O95049 919 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 AIF1P55008 147 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 SLC9A4Q6AI14 798 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 ASTLQ6HA08 431 aaPredicted RBP13.81□□□□□ -0.2
PRPF39-202ENST00000424478 BBS12Q6ZW61 710 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 NLRP14Q86W24 1093 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 CCNYQ8ND76 341 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 SLC39A8Q9C0K1 460 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 WDFY4Q6ZS81 3184 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 HOXD9P28356 352 aaPredicted RBP13.81□□□□□ -0.2
PRPF39-202ENST00000424478 MZF1P28698 734 aaPredicted RBP13.81□□□□□ -0.2
PRPF39-202ENST00000424478 VPS41P49754 854 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 GDF10P55107 478 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 SMAD4Q13485 552 aaKnown RBP13.81□□□□□ -0.2
PRPF39-202ENST00000424478 PPP2R5EQ16537 467 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 GPR153Q6NV75 609 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 P3H4Q92791 437 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 SPON2Q9BUD6 331 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 ZNF212Q9UDV6 495 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 AMACRQ9UHK6 382 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 H0Y626 953 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 KCNK1O00180 336 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 ZSCAN5DPP0CG00 497 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 SLC7A5Q01650 507 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 PSTKQ8IV42 348 aaKnown RBP13.81□□□□□ -0.2
PRPF39-202ENST00000424478 MAGOHBQ96A72 148 aaKnown RBP13.81□□□□□ -0.2
PRPF39-202ENST00000424478 HMCESQ96FZ2 354 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 DCLK3Q9C098 648 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 SEPT10Q9P0V9 454 aa13.81□□□□□ -0.2
PRPF39-202ENST00000424478 IGLV3-10A0A075B6K4 115 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 ZSCAN5CA6NGD5 496 aaPredicted RBP13.8□□□□□ -0.2
PRPF39-202ENST00000424478 NARSO43776 548 aaKnown RBP13.8□□□□□ -0.2
PRPF39-202ENST00000424478 CYP17A1P05093 508 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 TYRP14679 529 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 CETN2P41208 172 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 EML3Q32P44 896 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 FYB2Q5VWT5 728 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 ARHGAP12Q8IWW6 846 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 RTL3Q8N8U3 475 aaKnown RBP13.8□□□□□ -0.2
PRPF39-202ENST00000424478 USP33Q8TEY7 942 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 IRF7Q92985 503 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 CCDC114Q96M63 670 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 L2HGDHQ9H9P8 463 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 HPS4Q9NQG7 708 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 SPHK2Q9NRA0 654 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 MIA3Q5JRA6 1907 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 H7C0C1 242 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 TUBB4AP04350 444 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 CD70P32970 193 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 ATP5OP48047 213 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 SLC6A11P48066 632 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 IFNAR2P48551 515 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 EIF3EP60228 445 aaKnown RBP13.8□□□□□ -0.2
PRPF39-202ENST00000424478 COPS2P61201 443 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 DHCR24Q15392 516 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 LINGO4Q6UY18 593 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 BDP1A6H8Y1 2624 aa13.8□□□□□ -0.2
PRPF39-202ENST00000424478 TTC24A2A3L6 582 aaPredicted RBP13.79□□□□□ -0.2
PRPF39-202ENST00000424478 DRGXA6NNA5 263 aa13.79□□□□□ -0.2
PRPF39-202ENST00000424478 J3KR12 359 aa13.79□□□□□ -0.2
PRPF39-202ENST00000424478 AP1B1Q10567 949 aa13.79□□□□□ -0.2
PRPF39-202ENST00000424478 CDH18Q13634 790 aa13.79□□□□□ -0.2
PRPF39-202ENST00000424478 WHAMMP3Q1A5X7 153 aa13.79□□□□□ -0.2
PRPF39-202ENST00000424478 CXorf57Q6NSI4 855 aaKnown RBP13.79□□□□□ -0.2
PRPF39-202ENST00000424478 MFN1Q8IWA4 741 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms