RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 CCL15Q16663 113 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 NCBP2-AS2Q69YL0 99 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 DPY19L2Q6NUT2 758 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 CASC4Q6P4E1 433 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 PAQR9Q6ZVX9 377 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 ARRDC4Q8NCT1 418 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 KCTD15Q96SI1 283 aaPredicted RBP13.37□□□□□ -0.27
CLINT1-201ENST00000411809 MAN1C1Q9NR34 630 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 IL1RAPL1Q9NZN1 696 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 SNX9Q9Y5X1 595 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 FRMPD3Q5JV73 1810 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 CAPN8A6NHC0 703 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 RECQL4O94761 1208 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 RAG1P15918 1043 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 VCLP18206 1134 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 CRABP2P29373 138 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 BST2Q10589 180 aaKnown RBP13.36□□□□□ -0.27
CLINT1-201ENST00000411809 PPP2R5DQ14738 602 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 PAOXQ6QHF9 649 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 CYS1Q717R9 158 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 DEFB107AQ8IZN7 70 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 NETO2Q8NC67 525 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 CCDC106Q9BWC9 280 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 GCOM2Q9BZD3 368 aaPredicted RBP13.36□□□□□ -0.27
CLINT1-201ENST00000411809 XAB2Q9HCS7 855 aaKnown RBP13.36□□□□□ -0.27
CLINT1-201ENST00000411809 APOL1O14791 398 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 BUD23O43709 281 aaKnown RBP13.36□□□□□ -0.27
CLINT1-201ENST00000411809 TPSB2P20231 275 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 WARSP23381 471 aaKnown RBP13.36□□□□□ -0.27
CLINT1-201ENST00000411809 GRIA1P42261 906 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 ATXN1P54253 815 aaKnown RBP13.36□□□□□ -0.27
CLINT1-201ENST00000411809 TPSAB1Q15661 275 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 PLEKHH3Q7Z736 793 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 PIP4K2CQ8TBX8 421 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 SIGLEC10Q96LC7 697 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 RFPL1O75677 317 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 LRPAP1P30533 357 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 MSLNQ13421 630 aaPredicted RBP13.36□□□□□ -0.27
CLINT1-201ENST00000411809 SNX17Q15036 470 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 C4orf22Q6V702 233 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 MPP5Q8N3R9 675 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 NAT14Q8WUY8 206 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 FAM49BQ9NUQ9 324 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 PNPOQ9NVS9 261 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 DDX43Q9NXZ2 648 aaKnown RBP13.36□□□□□ -0.27
CLINT1-201ENST00000411809 PCDHGB4Q9UN71 923 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 PCDHGB5Q9Y5G0 923 aa13.36□□□□□ -0.27
CLINT1-201ENST00000411809 SF3B1O75533 1304 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■■■■ 137.6
CLINT1-201ENST00000411809 GABRDO14764 452 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 METTL18O95568 372 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 FAM163BP0C2L3 166 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 CCDC130P13994 396 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 INHBCP55103 352 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 FKBP1BP68106 108 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 SEMA5AQ13591 1074 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 FASTKD1Q53R41 847 aaKnown RBP13.35□□□□□ -0.27
CLINT1-201ENST00000411809 KIAA0319Q5VV43 1072 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 STEAP4Q687X5 459 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 STRADAQ7RTN6 431 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 CCDC185Q8N715 623 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 RNF148Q8N7C7 305 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 BEST2Q8NFU1 509 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 ATXN7L3BQ96GX2 97 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 LMCD1Q9NZU5 365 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 FZD10Q9ULW2 581 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 UBQLN1Q9UMX0 589 aaKnown RBP13.35□□□□□ -0.27
CLINT1-201ENST00000411809 APOBEC2Q9Y235 224 aaKnown RBP13.35□□□□□ -0.27
CLINT1-201ENST00000411809 VAV1P15498 845 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 CYP2F1P24903 491 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 NR2C2P49116 596 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 BCAT1P54687 386 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 USP46P62068 366 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 PDK3Q15120 406 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 EML3Q32P44 896 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 SPRYD7Q5W111 196 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 IYDQ6PHW0 289 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 OSTM1Q86WC4 334 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 PDSS2Q86YH6 399 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 PSTKQ8IV42 348 aaKnown RBP13.35□□□□□ -0.27
CLINT1-201ENST00000411809 ARHGAP18Q8N392 663 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 STKLD1Q8NE28 680 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 LRRC39Q96DD0 335 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 HSFY1Q96LI6 401 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 CSPG4P5Q96PW8 444 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 PPP1R10Q96QC0 940 aaKnown RBP13.35□□□□□ -0.27
CLINT1-201ENST00000411809 OSMRQ99650 979 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 KLHL4Q9C0H6 718 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 RCOR3Q9P2K3 495 aaPredicted RBP13.35□□□□□ -0.27
CLINT1-201ENST00000411809 APPL1Q9UKG1 709 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 SLC4A7Q9Y6M7 1214 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 CENPFP49454 3210 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 FAM159BA6NKW6 160 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 KPNA7A9QM74 516 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 TRDMT1O14717 391 aaKnown RBP13.35□□□□□ -0.27
CLINT1-201ENST00000411809 KLF11O14901 512 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 ALDH1A2O94788 518 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 SDC4P31431 198 aa13.35□□□□□ -0.27
CLINT1-201ENST00000411809 GBE1Q04446 702 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms