RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 WSCD1Q658N2 575 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 POMGNT2Q8NAT1 580 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 RSPH1Q8WYR4 309 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 LENG9Q96B70 501 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 BATF3Q9NR55 127 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 ANKRD6Q9Y2G4 727 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 CALB2P22676 271 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 SKP1P63208 163 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 IRX1P78414 480 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 SPPL2AQ8TCT8 520 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 PNMA5Q96PV4 448 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 RHBGQ9H310 441 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 CATSPERZQ9NTU4 200 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 SOHLH2Q9NX45 425 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 STK39Q9UEW8 545 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 KCNK1O00180 336 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 EML1O00423 815 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 FKTNO75072 461 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 GP5P40197 560 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 MARSP56192 900 aaKnown RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 DEFB115Q30KQ5 88 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 NOL9Q5SY16 702 aaKnown RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 TRAF7Q6Q0C0 670 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 DET1Q7L5Y6 550 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 FIBCD1Q8N539 461 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 VCPIP1Q96JH7 1222 aa10.59□□□□□ -0.71
COL4A6-203ENST00000394872 GEMIN8Q9NWZ8 242 aaKnown RBP10.59□□□□□ -0.71
COL4A6-203ENST00000394872 A0A088AWK7 358 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 SMNDC1O75940 238 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 DLGAP3O95886 979 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 ZNF10P21506 573 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 GPR15P49685 360 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 CYP2A13Q16696 494 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 RINLQ6ZS11 566 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 RIPOR1Q6ZS17 1223 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 FAM228AQ86W67 206 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 CCDC103Q8IW40 242 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 FBXO25Q8TCJ0 367 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 NACC2Q96BF6 587 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 PORCNQ9H237 461 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 DLGAP2Q9P1A6 1054 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 PRKAG3Q9UGI9 489 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 SF3B1O75533 1304 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 CCDC154A6NI56 674 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 SH3BGRLO75368 114 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 PARNO95453 639 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 PABPC1P11940 636 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 NQO1P15559 274 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 HPCAL1P37235 193 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 ILF2Q12905 390 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 TCEA2Q15560 299 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 NTRK3Q16288 839 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 SLC45A4Q5BKX6 768 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 PRR23CQ6ZRP0 262 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 MARK2Q7KZI7 788 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 MTDHQ86UE4 582 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 GATAD2AQ86YP4 633 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 MAP4K3Q8IVH8 894 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 HELQQ8TDG4 1101 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 SHOC2Q9UQ13 582 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 CES2O00748 559 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 ACADSP16219 412 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 AMD1P17707 334 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 POM121L1PQ3SYA9 428 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 GJC2Q5T442 439 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 HECTD3Q5T447 861 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 RAP1GAP2Q684P5 730 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 TMEM26Q6ZUK4 368 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 HNRNPLLQ8WVV9 542 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 DNAJC1Q96KC8 554 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 TMEM134Q9H6X4 195 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 STMN3Q9NZ72 180 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 POLR1DQ9Y2S0 133 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 CASZ1Q86V15 1759 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 SMIM22K7EJ46 135 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 HMGCRP04035 888 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 MIPP30301 263 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 FKBP1CQ5VVH2 108 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 ENTPD4Q9Y227 616 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 CRYL1Q9Y2S2 319 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 MRPS23Q9Y3D9 190 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 RIMBP3CA6NJZ7 1639 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 RIMBP3BA6NNM3 1639 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 RIMBP3Q9UFD9 1639 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 SLC15A5A6NIM6 579 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 CNOT3O75175 753 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 FCGR1AP12314 374 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 SARSP49591 514 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 CRY1Q16526 586 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 CBWD6Q4V339 395 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 NOMO2Q5JPE7 1267 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 ZNF655Q8N720 491 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 UTP15Q8TED0 518 aaKnown RBP10.58□□□□□ -0.72
COL4A6-203ENST00000394872 ADI1Q9BV57 179 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 POMKQ9H5K3 350 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 NOD2Q9HC29 1040 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 LRRIQ1Q96JM4 1722 aa10.58□□□□□ -0.72
COL4A6-203ENST00000394872 DNALI1O14645 258 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-203ENST00000394872 HSMCR30P0CW71 290 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms