RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 RGS4P49798 205 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 RHOAP61586 193 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 SKOR1P84550 965 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 SLC6A3Q01959 620 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 SLC34A1Q06495 639 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 STX5Q13190 355 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 TRIM25Q14258 630 aaKnown RBP5.09□□□□□ -1.59
LTN1-202ENST00000389194 MTFR1Q15390 333 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 DDR2Q16832 855 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 RAP1GAP2Q684P5 730 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 MRNIPQ6NTE8 343 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 GPR141Q7Z602 305 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 CLVS1Q8IUQ0 354 aaPredicted RBP5.09□□□□□ -1.59
LTN1-202ENST00000389194 CCDC103Q8IW40 242 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 ATG16L2Q8NAA4 619 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 ZFP42Q96MM3 310 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 PAIP1Q9H074 479 aaKnown RBP5.09□□□□□ -1.59
LTN1-202ENST00000389194 PORCNQ9H237 461 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 ACTR8Q9H981 624 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 NMRAL1Q9HBL8 299 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 NCKIPSDQ9NZQ3 722 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 SLC24A2Q9UI40 661 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 LSM7Q9UK45 103 aaKnown RBP5.09□□□□□ -1.59
LTN1-202ENST00000389194 ATP11BQ9Y2G3 1177 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 TSC22D4Q9Y3Q8 395 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 TCRBV9S1A1TA0A576 114 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 IQCA1LA6NCM1 817 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 EVPLLA8MZ36 301 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 PRR5-ARHGAP8B1AHC4 643 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 TIMM44O43615 452 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 SOAT2O75908 522 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 ALDH1A1P00352 501 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 LGALS2P05162 132 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 RHOCP08134 193 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 OCM2P0CE71 109 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 OCMP0CE72 109 aaPredicted RBP5.09□□□□□ -1.59
LTN1-202ENST00000389194 NFKB1P19838 968 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 ST8SIA6P61647 398 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 TGFB2P61812 414 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 ARHGAP8P85298 464 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 GALNT3Q14435 633 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 ZNF460Q14592 562 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 SLC9A5Q14940 896 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 KYAT1Q16773 422 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 DOK6Q6PKX4 331 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 TLK2Q86UE8 772 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 PIGZQ86VD9 579 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 VSIG10LQ86VR7 867 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 LGI2Q8N0V4 545 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 C3orf20Q8ND61 904 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 FAM156AQ8NDB6 213 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 SENP8Q96LD8 212 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 CDT1Q9H211 546 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 ZNF556Q9HAH1 456 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 ARL8BQ9NVJ2 186 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 IMPAD1Q9NX62 359 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 ITM2BQ9Y287 266 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 PRKAB1Q9Y478 270 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 MYH13Q9UKX3 1938 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 FRMPD1Q5SYB0 1578 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 VPS26AO75436 327 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 GRIA3P42263 894 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 GEMP55040 296 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 OXCT1P55809 520 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 CDK16Q00536 496 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 GBE1Q04446 702 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 MARK2Q7KZI7 788 aaKnown RBP5.09□□□□□ -1.59
LTN1-202ENST00000389194 LPCAT2Q7L5N7 544 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 LINC00523Q86TU6 105 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 AMIGO3Q86WK7 504 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 CENPLQ8N0S6 344 aaPredicted RBP5.09□□□□□ -1.59
LTN1-202ENST00000389194 STK32AQ8WU08 396 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 TMEM169Q96HH4 297 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 NPAS2Q99743 824 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 KCTD14Q9BQ13 255 aaPredicted RBP5.09□□□□□ -1.59
LTN1-202ENST00000389194 TUBGCP4Q9UGJ1 667 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 LIMD1Q9UGP4 676 aa5.09□□□□□ -1.59
LTN1-202ENST00000389194 RP1L1Q8IWN7 2480 aaPredicted RBP5.09□□□□□ -1.59
LTN1-202ENST00000389194 TRPC5OSA6NMA1 111 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 TM9SF1O15321 606 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 TRIM13O60858 407 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 LRATO95237 230 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 ACADSP16219 412 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 GP5P40197 560 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 NOMO3P69849 1222 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 CYP4F2P78329 520 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 MCL1Q07820 350 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 CYP4F3Q08477 520 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 ARHGAP17Q68EM7 881 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 DCP1BQ8IZD4 617 aaKnown RBP5.09□□□□□ -1.6
LTN1-202ENST00000389194 GRIN3AQ8TCU5 1115 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 MAGEE2Q8TD90 523 aaPredicted RBP5.09□□□□□ -1.6
LTN1-202ENST00000389194 PPP1R10Q96QC0 940 aaKnown RBP5.09□□□□□ -1.6
LTN1-202ENST00000389194 ADAM2Q99965 735 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 CLPBQ9H078 707 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 ZFYVE28Q9HCC9 887 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 THAP1Q9NVV9 213 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 SYBUQ9NX95 663 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 BTBD7Q9P203 1132 aa5.09□□□□□ -1.6
LTN1-202ENST00000389194 VAV3Q9UKW4 847 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms