RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CLPTM1O96005 669 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 C2P06681 752 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 STX1BP61266 288 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SLC10A2Q12908 348 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 LAMB3Q13751 1172 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ILDR2Q71H61 639 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SLC41A1Q8IVJ1 513 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 BHLHE22Q8NFJ8 381 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PPP2R3CQ969Q6 453 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TNIP3Q96KP6 325 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ULBP1Q9BZM6 244 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 LHX5Q9H2C1 402 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CYP3A43Q9HB55 503 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 E7ENQ6 273 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GIPC1O14908 333 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MAP3K13O43283 966 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SERPINA6P08185 405 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 COX4I1P13073 169 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ERCC2P18074 760 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GNAZP19086 355 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MRPS5P82675 430 aaKnown RBP14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 KCNJ11Q14654 390 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ADGRF2Q8IZF7 708 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZFP42Q96MM3 310 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 LRRC40Q9H9A6 602 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PCDHA11Q9Y5I1 949 aa14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 XIRP1Q702N8 1843 aaKnown RBP14.71□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NEMP2A6NFY4 417 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 OR6B1O95007 311 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NFKB1P19838 968 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 BCAT1P54687 386 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 DLG1Q12959 904 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CYLC2Q14093 348 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 AGKQ53H12 422 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 WSCD1Q658N2 575 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 BNC2Q6ZN30 1099 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FRMD7Q6ZUT3 714 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TMC7Q7Z402 723 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TFAP2DQ7Z6R9 452 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SPATA22Q8NHS9 363 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NIFKQ9BYG3 293 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FRMD8P1Q9BZ68 369 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NACA2Q9H009 215 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CXCL16Q9H2A7 254 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 WDCPQ9H6R7 721 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PFDN4Q9NQP4 134 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CDYLQ9Y232 598 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TRDMT1O14717 391 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PLIN3O60664 434 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 BST2Q10589 180 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 LDB1Q86U70 411 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PLD6Q8N2A8 252 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SKA1Q96BD8 255 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 OR52B2Q96RD2 323 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 KCNK13Q9HB14 408 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 USP29Q9HBJ7 922 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZNF711Q9Y462 761 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 A0A1B0GVG6 124 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NCF1BA6NI72 391 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SAC3D1A6NKF1 404 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NCF1CA8MVU1 366 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CASQ2O14958 399 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NCF1P14598 390 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MBTD1Q05BQ5 628 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 RALGDSQ12967 914 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FUT11Q495W5 492 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SLC9B1Q4ZJI4 515 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PITRM1Q5JRX3 1037 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 OTOP3Q7RTS5 596 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SATL1Q86VE3 508 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 AFAP1L2Q8N4X5 818 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 DCUN1D5Q9BTE7 237 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PDZD7Q9H5P4 517 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PDLIM7Q9NR12 457 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 BCAP29Q9UHQ4 241 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ADAMTSL1Q8N6G6 1762 aa14.7□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TMEM233B4DJY2 109 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 LTFP02788 710 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TGFB3P10600 412 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GRIA4P48058 902 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PLOD1Q02809 727 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PDK3Q15120 406 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ANO4Q32M45 955 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TRNP1Q6NT89 227 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NET1Q7Z628 596 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 URGCPQ8TCY9 931 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ASB7Q9H672 318 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TXNRD2Q9NNW7 524 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 RNF181Q9P0P0 153 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 XPOTO43592 962 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FKBP6O75344 327 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MYCP01106 439 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZNF132P52740 706 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PTK2BQ14289 1009 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GRIK4Q16099 956 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TSHZ1Q6ZSZ6 1077 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 KYQ8NBH2 561 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MCRS1Q96EZ8 462 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CCT7Q99832 543 aa14.69□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FICDQ9BVA6 458 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms