RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ZIC5Q96T25 663 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 XAB2Q9HCS7 855 aaKnown RBP14.36□□□□□ -0.11
MSH5-202ENST00000375740 WDR6Q9NNW5 1121 aaKnown RBP14.36□□□□□ -0.11
MSH5-202ENST00000375740 CNGB3Q9NQW8 809 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 HHLA1C9JL84 531 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 I6L893 689 aaPredicted RBP14.35□□□□□ -0.11
MSH5-202ENST00000375740 AMHP03971 560 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 ETS2P15036 469 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 FDFT1P37268 417 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 FLT3LGP49771 235 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 NEK3P51956 506 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 PAFAH1B3Q15102 231 aaKnown RBP14.35□□□□□ -0.11
MSH5-202ENST00000375740 MTDHQ86UE4 582 aaKnown RBP14.35□□□□□ -0.11
MSH5-202ENST00000375740 WDR60Q8WVS4 1066 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 C10orf82Q8WW14 230 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 APOPT1Q96IL0 206 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 NDNQ99608 321 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 RTP3Q9BQQ7 232 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 VPS11Q9H270 941 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 PRDM12Q9H4Q4 367 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 SEPT10Q9P0V9 454 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 STOML1Q9UBI4 398 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 ZNF180Q9UJW8 692 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 PTCH2Q9Y6C5 1203 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 ASGR1P07306 291 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 SNRPAP09012 282 aaKnown RBP14.35□□□□□ -0.11
MSH5-202ENST00000375740 PTPN4P29074 926 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 GLUD2P49448 558 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 FCGRTP55899 365 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 PDK1Q15118 436 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 APLFQ8IW19 511 aaPredicted RBP14.35□□□□□ -0.11
MSH5-202ENST00000375740 KLHL23Q8NBE8 558 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 GSDMBQ8TAX9 411 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 EDEM1Q92611 657 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 TRAPPC9Q96Q05 1148 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 SLC9A7Q96T83 725 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 PCDHA11Q9Y5I1 949 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 DNAH12Q6ZR08 3092 aa14.35□□□□□ -0.11
MSH5-202ENST00000375740 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
MSH5-202ENST00000375740 C9IYK1 514 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 DCLK1O15075 740 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 SEPT4O43236 478 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 KRT37O76014 449 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 STK10O94804 968 aaKnown RBP14.34□□□□□ -0.11
MSH5-202ENST00000375740 LTFP02788 710 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 CSH1P0DML2 217 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 CSH2P0DML3 217 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 ETV4P43268 484 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 BRCC3P46736 316 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 WASHC5Q12768 1159 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 KCNA10Q16322 511 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 LGSNQ5TDP6 509 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 FAM111AQ96PZ2 611 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 MANSC1Q9H8J5 431 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 FBXW11Q9UKB1 542 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 WDR27A2RRH5 827 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 CA12O43570 354 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 ZNF623O75123 536 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 ADAMTS4O75173 837 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 B3GAT3O94766 335 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 DHRS4L1P0CG22 281 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 ERCC2P18074 760 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 PCSK1P29120 753 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 CACNB2Q08289 660 aaPredicted RBP14.34□□□□□ -0.11
MSH5-202ENST00000375740 SREBF2Q12772 1141 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 CTC1Q2NKJ3 1217 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 LRRC74BQ6ZQY2 392 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 ZNF567Q8N184 647 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 PTPRN2Q92932 1015 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 MYLPFQ96A32 169 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 NTAN1Q96AB6 310 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 SMARCD1Q96GM5 515 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 PRR11Q96HE9 360 aaPredicted RBP14.34□□□□□ -0.11
MSH5-202ENST00000375740 XPNPEP3Q9NQH7 507 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 PIH1D1Q9NWS0 290 aaKnown RBP14.34□□□□□ -0.11
MSH5-202ENST00000375740 DDIT4Q9NX09 232 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 WASF2Q9Y6W5 498 aa14.34□□□□□ -0.11
MSH5-202ENST00000375740 SF3B1O75533 1304 aaKnown RBP eCLIP14.33□□□□□ -0.111e-8■■■■■ 28.9
MSH5-202ENST00000375740 FAM159BA6NKW6 160 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 OPHN1O60890 802 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 SKIP12755 728 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 CRADDP78560 199 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 BMPR2Q13873 1038 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 CNPY1Q3B7I2 92 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 CD300LGQ6UXG3 332 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 CDHR3Q6ZTQ4 885 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 BHLHA9Q7RTU4 235 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 HASPINQ8TF76 798 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 OXNAD1Q96HP4 312 aaPredicted RBP14.33□□□□□ -0.12
MSH5-202ENST00000375740 ZFP69BQ9UJL9 534 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 SDR42E2A6NKP2 422 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 TRAFD1O14545 582 aaPredicted RBP14.33□□□□□ -0.12
MSH5-202ENST00000375740 COPEO14579 308 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 RFPL1O75677 317 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 ODC1P11926 461 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 MLNP12872 115 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 BDNFP23560 247 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 PSMB4P28070 264 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 AIF1P55008 147 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 NKX3-2P78367 333 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms