RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PEX1O43933 1283 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 AVILO75366 819 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 LYPLA2O95372 231 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 DLGAP3O95886 979 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 RPL5P46777 297 aaKnown RBP11.77□□□□□ -0.53
PTCH1-203ENST00000375274 MSLNQ13421 630 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-203ENST00000375274 FBXO39Q8N4B4 442 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 LZTR1Q8N653 840 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 VPS33AQ96AX1 596 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 RNF145Q96MT1 663 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 ZBED2Q9BTP6 218 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 C9orf16Q9BUW7 83 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 CLPBQ9H078 707 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 CDHR5Q9HBB8 845 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 SETD4Q9NVD3 440 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 TUBGCP4Q9UGJ1 667 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 RABGEF1Q9UJ41 708 aa11.77□□□□□ -0.53
PTCH1-203ENST00000375274 GRIN2DO15399 1336 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 PRR5-ARHGAP8B1AHC4 643 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 BIRC5O15392 142 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 SERPINF2P08697 491 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 ADARP55265 1226 aaKnown RBP11.76□□□□□ -0.53
PTCH1-203ENST00000375274 RTP1P59025 263 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 TGFB2P61812 414 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 ARHGAP8P85298 464 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 EFEMP1Q12805 493 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 NEPROQ6NW34 567 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 TTC7BQ86TV6 843 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 BBS7Q8IWZ6 715 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 FBXW8Q8N3Y1 598 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 FAM120BQ96EK7 910 aaKnown RBP11.76□□□□□ -0.53
PTCH1-203ENST00000375274 PRDM12Q9H4Q4 367 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 RMND5AQ9H871 391 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 COMMD8Q9NX08 183 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 CACNA1FO60840 1977 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 FAM95CA0A1B0GW59 222 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 RGSL1A5PLK6 1076 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 FOXO6A8MYZ6 492 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 MGRN1O60291 552 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 ZNF286BP0CG31 522 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 UBA1P22314 1058 aaKnown RBP11.76□□□□□ -0.53
PTCH1-203ENST00000375274 PRIM2P49643 509 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 VAC14Q08AM6 782 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 FAM183BPQ6ZVS7 135 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 FAM126BQ8IXS8 530 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 MYO1HQ8N1T3 1032 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 NKX2-3Q8TAU0 364 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 POMKQ9H5K3 350 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 STN1Q9H668 368 aaKnown RBP11.76□□□□□ -0.53
PTCH1-203ENST00000375274 PLA2G4CQ9UP65 541 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-203ENST00000375274 ASMTLO95671 621 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 ZNF682O95780 498 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 ITGA2BP08514 1039 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 LRPAP1P30533 357 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 NOS2P35228 1153 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 TNFSF9P41273 254 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 AKT1S1Q96B36 256 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 PLEKHA8Q96JA3 519 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 MBOAT7Q96N66 472 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 ZNF670Q9BS34 389 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 ACE2Q9BYF1 805 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-203ENST00000375274 GLIS2Q9BZE0 524 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-203ENST00000375274 POPDC2Q9HBU9 364 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 PTPRHQ9HD43 1115 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 PCDHA11Q9Y5I1 949 aa11.76□□□□□ -0.53
PTCH1-203ENST00000375274 CETPP11597 493 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 IL5RAQ01344 420 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 CAPSQ13938 189 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 UGCGQ16739 394 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 AAGABQ6PD74 315 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 MIER2Q8N344 545 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 ATG16L2Q8NAA4 619 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 FNDC5Q8NAU1 212 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 GSTCDQ8NEC7 633 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 WNT8BQ93098 351 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 PNMA8BQ9ULN7 279 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-203ENST00000375274 EFR3BQ9Y2G0 817 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 PCDHAC2Q9Y5I4 1007 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 NFICP08651 508 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 CCDC130P13994 396 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 CREB1P16220 341 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 ATP1A4Q13733 1029 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 ZC3H12AQ5D1E8 599 aaKnown RBP11.75□□□□□ -0.53
PTCH1-203ENST00000375274 TFAP2DQ7Z6R9 452 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 CAMK1DQ8IU85 385 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 ZCCHC7Q8N3Z6 543 aaKnown RBP11.75□□□□□ -0.53
PTCH1-203ENST00000375274 EFCAB3Q8N7B9 438 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 JOSD2Q8TAC2 188 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 BHMTQ93088 406 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 NKD2Q969F2 451 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-203ENST00000375274 PRDM16Q9HAZ2 1276 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 GRHL1Q9NZI5 618 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 COMMD3-BMI1R4GMX3 469 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 DPYSL4O14531 572 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 ABLIM1O14639 778 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 RASSF9O75901 435 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 CYP1A1P04798 512 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-203ENST00000375274 FGFR3P22607 806 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms