RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PDGFAP04085 211 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 NEFHP12036 1026 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 EZRP15311 586 aaKnown RBP6.57□□□□□ -1.36
CHD6-202ENST00000373222 SDC4P31431 198 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 L1CAMP32004 1257 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 ELF1P32519 619 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 RENBPP51606 427 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 SESN3P58005 492 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 SLC6A3Q01959 620 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 RIPK1Q13546 671 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 PPP1R2P3Q6NXS1 205 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 FBXL19Q6PCT2 694 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 KCNT2Q6UVM3 1135 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 RGS9BPQ6ZS82 235 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 GBP7Q8N8V2 638 aaPredicted RBP6.57□□□□□ -1.36
CHD6-202ENST00000373222 RNF169Q8NCN4 708 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 ARRDC4Q8NCT1 418 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 USP33Q8TEY7 942 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 KBTBD7Q8WVZ9 684 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 EDEM1Q92611 657 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 TBCBQ99426 244 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 FAM167BQ9BTA0 163 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 LRMDAQ9H2I8 198 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 CXorf56Q9H5V9 222 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 ASB7Q9H672 318 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 NRDE2Q9H7Z3 1164 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 WDR35Q9P2L0 1181 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 FAM8A1Q9UBU6 413 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 HESX1Q9UBX0 185 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 KCNH4Q9UQ05 1017 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 A6NHS1 94 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 A8MXQ7 604 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 I6L893 689 aaPredicted RBP6.57□□□□□ -1.36
CHD6-202ENST00000373222 LYPLA1O75608 230 aaPredicted RBP6.57□□□□□ -1.36
CHD6-202ENST00000373222 RECQL4O94761 1208 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 DLDP09622 509 aaKnown RBP6.57□□□□□ -1.36
CHD6-202ENST00000373222 DHRS4L1P0CG22 281 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 MYL2P10916 166 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 RBP5P82980 135 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 PRKD1Q15139 912 aaPredicted RBP6.57□□□□□ -1.36
CHD6-202ENST00000373222 FAM187BQ17R55 369 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 RALGAPA2Q2PPJ7 1873 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 KLHL38Q2WGJ6 581 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 ZNF792Q3KQV3 632 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 HFE2Q6ZVN8 426 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 RASSF3Q86WH2 238 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 TREML1Q86YW5 311 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 SLC2A14Q8TDB8 520 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 DEPDC1BQ8WUY9 529 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 PGBD4Q96DM1 585 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 ATXN7L3BQ96GX2 97 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 APOPT1Q96IL0 206 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 CLPTM1LQ96KA5 538 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 SIGLEC10Q96LC7 697 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 MYCBPQ99417 103 aaPredicted RBP6.57□□□□□ -1.36
CHD6-202ENST00000373222 EBF4Q9BQW3 602 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 CADM1Q9BY67 442 aaKnown RBP6.57□□□□□ -1.36
CHD6-202ENST00000373222 NMUR2Q9GZQ4 415 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 ANLNQ9NQW6 1124 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 TMEM30AQ9NV96 361 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 SLC5A4Q9NY91 659 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 DTLQ9NZJ0 730 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 SENP1Q9P0U3 644 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 AP4E1Q9UPM8 1137 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 IKBKGQ9Y6K9 419 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 MYLKQ15746 1914 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.56□□□□□ -1.36
CHD6-202ENST00000373222 CCDC78A2IDD5 438 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 WDR27A2RRH5 827 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 FAM72CH0Y354 149 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 C2CD2LO14523 706 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 MFSD11O43934 449 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ABLIM3O94929 683 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 CD1EP15812 388 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 YBX3P16989 372 aaKnown RBP eCLIP6.56□□□□□ -1.36
CHD6-202ENST00000373222 SLC8A1P32418 973 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 GBP2P32456 591 aaPredicted RBP6.56□□□□□ -1.36
CHD6-202ENST00000373222 SLC26A2P50443 739 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 SESN2P58004 480 aaPredicted RBP6.56□□□□□ -1.36
CHD6-202ENST00000373222 CCDC15Q0P6D6 951 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 BST1Q10588 318 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 KHDC1Q4VXA5 237 aaKnown RBP6.56□□□□□ -1.36
CHD6-202ENST00000373222 ZNF484Q5JVG2 852 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ANKRD20A2Q5SQ80 823 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 FAM72AQ5TYM5 149 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ANKRD20A1Q5TYW2 823 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ANKRD20A3Q5VUR7 823 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 OTUD1Q5VV17 481 aaPredicted RBP6.56□□□□□ -1.36
CHD6-202ENST00000373222 SYPL2Q5VXT5 272 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 NCBP2-AS2Q69YL0 99 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 SLC9A4Q6AI14 798 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 FAM72DQ6L9T8 149 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 CATSPER4Q7RTX7 472 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 FAM72BQ86X60 149 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 CHCHD4Q8N4Q1 142 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 ZSCAN1Q8NBB4 408 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 GIMAP7Q8NHV1 300 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 PPTC7Q8NI37 304 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 MAGEC3Q8TD91 643 aa6.56□□□□□ -1.36
CHD6-202ENST00000373222 WDR60Q8WVS4 1066 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms