RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 FAM83EQ2M2I3 478 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 DUSP28Q4G0W2 176 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 APBB2Q92870 758 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 TLL1O43897 1013 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 ITGALP20701 1170 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 CYP2F1P24903 491 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 MTTPP55157 894 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 CCDC157Q569K6 752 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 ERAP2Q6P179 960 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 ZNF571Q7Z3V5 609 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 BBS7Q8IWZ6 715 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 NFKBIZQ9BYH8 718 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 SHCBP1LQ9BZQ2 653 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 KANSL1LA0AUZ9 987 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 MMP3P08254 477 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 OTUD4Q01804 1114 aaKnown RBP13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 ITGA7Q13683 1181 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 PACS2Q86VP3 889 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 FBXO25Q8TCJ0 367 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 ATG4AQ8WYN0 398 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 FICDQ9BVA6 458 aa13.59□□□□□ -0.23
RAPGEF1-201ENST00000372189 OR1E1P30953 314 aa13.58□□□□□ -0.23
RAPGEF1-201ENST00000372189 AQP5P55064 265 aa13.58□□□□□ -0.23
RAPGEF1-201ENST00000372189 MTM1Q13496 603 aa13.58□□□□□ -0.23
RAPGEF1-201ENST00000372189 CCDC81Q6ZN84 652 aa13.58□□□□□ -0.23
RAPGEF1-201ENST00000372189 CAPSLQ8WWF8 208 aa13.58□□□□□ -0.23
RAPGEF1-201ENST00000372189 PAFAH2Q99487 392 aa13.58□□□□□ -0.23
RAPGEF1-201ENST00000372189 MFSD1Q9H3U5 465 aa13.58□□□□□ -0.23
RAPGEF1-201ENST00000372189 TMEM51Q9NW97 253 aa13.58□□□□□ -0.23
RAPGEF1-201ENST00000372189 RAMP2O60895 175 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 PTENP60484 403 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 SPIRE1Q08AE8 756 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 TOMM20Q15388 145 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 OASLQ15646 514 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 HIPK3Q9H422 1215 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 RGS17Q9UGC6 210 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 C15orf41Q9Y2V0 281 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 SPEF1Q9Y4P9 236 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 ROBO1Q9Y6N7 1651 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 F8W810 466 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 SOAT2O75908 522 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 SOX11P35716 441 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 ZNF280AP59817 542 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 MCL1Q07820 350 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 MCOLN2Q8IZK6 566 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 LGI2Q8N0V4 545 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 AENQ8WTP8 325 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 ELMO3Q96BJ8 720 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 NMD3Q96D46 503 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 CCDC126Q96EE4 140 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 SLC39A3Q9BRY0 314 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 SPATA2Q9UM82 520 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 COL1A2P08123 1366 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 ADGRA2Q96PE1 1338 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 FSBPO95073 299 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 TUBP50607 506 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 SCNN1BP51168 640 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 SULT1C3Q6IMI6 304 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 EXD1Q8NHP7 514 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 HAS1Q92839 578 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 DEPDC7Q96QD5 511 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 ACO2Q99798 780 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 TMEM245Q9H330 911 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 TBC1D13Q9NVG8 400 aa13.58□□□□□ -0.24
RAPGEF1-201ENST00000372189 EVPLLA8MZ36 301 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 MFN2O95140 757 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 PTPN1P18031 435 aaKnown RBP13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 PBLDP30039 288 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 SLC34A1Q06495 639 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 USP41Q3LFD5 358 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 WSCD1Q658N2 575 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 KCNK18Q7Z418 384 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 KCTD4Q8WVF5 259 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 ECSITQ9BQ95 431 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 WWOXQ9NZC7 414 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 ARHGAP20Q9P2F6 1191 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 JCHAINP01591 159 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 USP17L7P0C7H9 530 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 FLT3P36888 993 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 CSTF3Q12996 717 aaKnown RBP13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 MINDY2Q8NBR6 621 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 LPPQ93052 612 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 PHF21AQ96BD5 680 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 ATP13A1Q9HD20 1204 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 RNF19AQ9NV58 838 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 DRG1Q9Y295 367 aaKnown RBP13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 DNAJC16Q9Y2G8 782 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 SNX13Q9Y5W8 968 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 SLCO1B7G3V0H7 640 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 FARP2O94887 1054 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 CAPSQ13938 189 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 TFAP2DQ7Z6R9 452 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 SCUBE3Q8IX30 993 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 PIGUQ9H490 435 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 ABCC13Q9NSE7 274 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 SPG21Q9NZD8 308 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 SELENONQ9NZV5 590 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 GIT1Q9Y2X7 761 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 SDR42E2A6NKP2 422 aa13.57□□□□□ -0.24
RAPGEF1-201ENST00000372189 RIPK2O43353 540 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms