RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 RASAL3Q86YV0 1011 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 GABBR1Q9UBS5 961 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 SHOC2Q9UQ13 582 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 A0A087X0T9 212 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 KIF28PB7ZC32 967 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 KDM4BO94953 1096 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 BMP10O95393 424 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 HPCAL1P37235 193 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 SLC9A3P48764 834 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 ERVK-24P63145 666 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 FAXCQ5TGI0 409 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 BLOC1S5Q8TDH9 187 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 PHF21BQ96EK2 531 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 SLC4A9Q96Q91 983 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 TMEM121Q9BTD3 319 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 ZFYVE28Q9HCC9 887 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 PIH1D3Q9NQM4 214 aaKnown RBP15.55■□□□□ 0.08
COL5A1-201ENST00000371817 GPN3Q9UHW5 284 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-201ENST00000371817 CES2O00748 559 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 SNX4O95219 450 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 ASS1P00966 412 aaKnown RBP15.55■□□□□ 0.08
COL5A1-201ENST00000371817 CYBBP04839 570 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 SLC2A4P14672 509 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 DPYSQ14117 519 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 AFTPHQ6ULP2 937 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 STOX1Q6ZVD7 989 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 HPS6Q86YV9 775 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 ZNF615Q8N8J6 731 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 ZNF398Q8TD17 642 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 SEMA4DQ92854 862 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 ART5Q96L15 291 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 NT5C1AQ9BXI3 368 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 A0A0A6YYK5 440 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-201ENST00000371817 DPPA5A6NC42 116 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 PSMD12O00232 456 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-201ENST00000371817 CYP2C8P10632 490 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 VEPH1Q14D04 833 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 PI16Q6UXB8 463 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 DEF8Q6ZN54 512 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 PTGFRNQ9P2B2 879 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 PTPRTO14522 1441 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 GPAT2Q6NUI2 795 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 TMEM179Q6ZVK1 233 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 SPATA2LQ8IUW3 424 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-201ENST00000371817 POMGNT2Q8NAT1 580 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 EFR3BQ9Y2G0 817 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 MYO9BQ13459 2157 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 ALDH1A1P00352 501 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 SDC2P34741 201 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 AP3S2P59780 193 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 KLHDC7AQ5VTJ3 777 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 RPTNQ6XPR3 784 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 STRBPQ96SI9 672 aaKnown RBP15.55■□□□□ 0.08
COL5A1-201ENST00000371817 GTF3C4Q9UKN8 822 aa15.55■□□□□ 0.08
COL5A1-201ENST00000371817 TTLL13PA6NNM8 815 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 BOLA3Q53S33 107 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 DDX53Q86TM3 631 aaKnown RBP15.54■□□□□ 0.08
COL5A1-201ENST00000371817 ASB2Q96Q27 587 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 ZNF518AQ6AHZ1 1483 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 FAPQ12884 760 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 TMEM132DQ14C87 1099 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 HKDC1Q2TB90 917 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 TNFAIP8L1Q8WVP5 186 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 ALADP13716 330 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 SNRPFP62306 86 aaKnown RBP15.54■□□□□ 0.08
COL5A1-201ENST00000371817 PDK2Q15119 407 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 AASDHPPTQ9NRN7 309 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 MAGEB16A2A368 324 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 CCRL2O00421 344 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 SNX3O60493 162 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 NOL4O94818 638 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 IFI35P80217 286 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-201ENST00000371817 STARD8Q92502 1023 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 DOLKQ9UPQ8 538 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 MCCD1P59942 119 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-201ENST00000371817 RBP5P82980 135 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 SIRT2Q8IXJ6 389 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 POP5Q969H6 163 aaKnown RBP15.54■□□□□ 0.08
COL5A1-201ENST00000371817 TMEM168Q9H0V1 697 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 MORF4L1Q9UBU8 362 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 FESP07332 822 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 CRABP2P29373 138 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 PRR5LQ6MZQ0 368 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 RABL2AQ9UBK7 228 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-201ENST00000371817 POLR1DQ9Y2S0 133 aa15.54■□□□□ 0.08
COL5A1-201ENST00000371817 MROH7-TTC4A0A0A0MT08 1334 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 FAM228BP0C875 321 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 NMT1P30419 496 aaKnown RBP15.53■□□□□ 0.08
COL5A1-201ENST00000371817 GFM1Q96RP9 751 aaKnown RBP15.53■□□□□ 0.08
COL5A1-201ENST00000371817 CLPBQ9H078 707 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 AP3D1O14617 1153 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 CBX5P45973 191 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 GALNT18Q6P9A2 607 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 DAW1Q8N136 415 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 TATDN2Q93075 761 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 BHLHE41Q9C0J9 482 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-201ENST00000371817 BCS1LQ9Y276 419 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 DGKBQ9Y6T7 804 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 ERI2A8K979 691 aaKnown RBP15.53■□□□□ 0.08
COL5A1-201ENST00000371817 FAM47E-STBD1D6RA91 191 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms