RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 AHI1Q8N157 1196 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 C17orf53Q8N3J3 647 aaPredicted RBP15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 CCDC26Q8TAB7 109 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 ERLEC1Q96DZ1 483 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 PANX2Q96RD6 677 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 GPATCH2LQ9NWQ4 482 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 CACNA2D2Q9NY47 1150 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 ANAPC7Q9UJX3 599 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 FZD10Q9ULW2 581 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 PYCARDQ9ULZ3 195 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 NEU3Q9UQ49 428 aa15.54■□□□□ 0.08
SMPDL3A-201ENST00000368440 LRCH4O75427 683 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 TCF4P15884 667 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 FECHP22830 423 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 MZF1P28698 734 aaPredicted RBP15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 CSKP41240 450 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 PXNP49023 591 aaPredicted RBP15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 EIF4HQ15056 248 aaKnown RBP15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 MBLAC2Q68D91 279 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 CYP4V2Q6ZWL3 525 aaPredicted RBP15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 TFAP2DQ7Z6R9 452 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 APCDD1Q8J025 514 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 ZNF564Q8TBZ8 553 aaPredicted RBP15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 WFIKKN2Q8TEU8 576 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 CYB5D2Q8WUJ1 264 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 CTNNBL1Q8WYA6 563 aaPredicted RBP15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 OSBPL2Q9H1P3 480 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 OR12D3Q9UGF7 316 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 PCSK1NQ9UHG2 260 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 SLC8A2Q9UPR5 921 aa15.53■□□□□ 0.08
SMPDL3A-201ENST00000368440 SOWAHDA6NJG2 315 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 TMEM253P0C7T8 217 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 MIPP30301 263 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 NTSR1P30989 418 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 IL12RB1P42701 662 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 CDH4P55283 916 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 ZNF234Q14588 700 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 CA9Q16790 459 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 PITRM1Q5JRX3 1037 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 LRRC31Q6UY01 552 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 CPNE8Q86YQ8 564 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 CHPFQ8IZ52 775 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 ZNF557Q8N988 423 aaPredicted RBP15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 KCNV2Q8TDN2 545 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 KIAA1522Q9P206 1035 aaPredicted RBP15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 CTTNBP2NLQ9P2B4 639 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 THAP10Q9P2Z0 257 aaPredicted RBP15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 ZNF212Q9UDV6 495 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 RAD54BQ9Y620 910 aa15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 NYNRINQ9P2P1 1898 aaKnown RBP15.52■□□□□ 0.08
SMPDL3A-201ENST00000368440 CLDN11O75508 207 aa15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 LRIG2O94898 1065 aa15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 DESP17661 470 aa15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 NRG1Q02297 640 aaPredicted RBP15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 CRY1Q16526 586 aa15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 PTPRNQ16849 979 aa15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 HSF5Q4G112 596 aaPredicted RBP15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 EFHC2Q5JST6 749 aa15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 HEATR6Q6AI08 1181 aaKnown RBP15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 CCDC117Q8IWD4 279 aaPredicted RBP15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 NELL1Q92832 810 aa15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 SNRNP25Q9BV90 132 aaKnown RBP15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 OSGEPQ9NPF4 335 aa15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 STON1Q9Y6Q2 735 aa15.52■□□□□ 0.07
SMPDL3A-201ENST00000368440 CKAP5Q14008 2032 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 RNF8O76064 485 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 HOXB2P14652 356 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 POLR2EP19388 210 aaKnown RBP15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 IL1R2P27930 398 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 CTSOP43234 321 aaPredicted RBP15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 FNTBP49356 437 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 ZNF177Q13360 481 aaPredicted RBP15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 PLEKHG6Q3KR16 790 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 ZNF528Q3MIS6 628 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 EOGTQ5NDL2 527 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 ACBD5Q5T8D3 534 aaPredicted RBP15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 KIAA1211LQ6NV74 962 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 TRMT11Q7Z4G4 463 aaKnown RBP15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 TMEM139Q8IV31 216 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 UCMAQ8WVF2 138 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 ATOH1Q92858 354 aaPredicted RBP15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 ALG14Q96F25 216 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 GABRG3Q99928 467 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 ZYG11BQ9C0D3 744 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 PPARGC1AQ9UBK2 798 aaKnown RBP15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 TFR2Q9UP52 801 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 AP4E1Q9UPM8 1137 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 TBC1D30Q9Y2I9 924 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 R4GN57 208 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 VPS13AQ96RL7 3174 aa15.51■□□□□ 0.07
SMPDL3A-201ENST00000368440 A0A1W2PQF6 199 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 LCA5LO95447 670 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 PRKCHP24723 683 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 NHLH1Q02575 133 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 SEMA3BQ13214 749 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 ENPP2Q13822 863 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 RWDD4Q6NW29 188 aaKnown RBP15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 RAD9BQ6WBX8 426 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 ZNF366Q8N895 744 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms