RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 TMEM233B4DJY2 109 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 LTFP02788 710 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 TPP2P29144 1249 aaPredicted RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 CRHR1P34998 444 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 SPRP35270 261 aaPredicted RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 CDK7P50613 346 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 GALK1P51570 392 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 FKBP1AP62942 108 aaKnown RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 ADIGQ0VDE8 80 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 RALGDSQ12967 914 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 KLF10Q13118 480 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 CTBP1Q13363 440 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 BNC2Q6ZN30 1099 aaPredicted RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 MOB2Q70IA6 237 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 ARHGAP18Q8N392 663 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 SIGLEC10Q96LC7 697 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 PCYT2Q99447 389 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 CHRAC1Q9NRG0 131 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 CHCHD3Q9NX63 227 aaKnown RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 NUDT5Q9UKK9 219 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 PCDHA11Q9Y5I1 949 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 MAFBQ9Y5Q3 323 aaPredicted RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 CDY2AQ9Y6F7 541 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 CDY1Q9Y6F8 540 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 EEF2KO00418 725 aaKnown RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 TRDMT1O14717 391 aaKnown RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 AKAP10O43572 662 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 CILPO75339 1184 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 ITGBL1O95965 494 aaPredicted RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 ALDOAP04075 364 aaKnown RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 CHN2P52757 468 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 CYLC2Q14093 348 aaPredicted RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 DGKDQ16760 1214 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 KIF19Q2TAC6 998 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 XRRA1Q6P2D8 792 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 MPHOSPH6Q99547 160 aaKnown RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 MMADHCQ9H3L0 296 aaPredicted RBP11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 PCDHGC3Q9UN70 934 aa11.29□□□□□ -0.6
NECTIN4-201ENST00000368012 RNF103-CHMP3A0A140T963 221 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 E7ESA3 106 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 MFSD11O43934 449 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 PLA2G6O60733 806 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 ATP6V1G1O75348 118 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 ZNF132P52740 706 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 HDAC4P56524 1084 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 WASHC5Q12768 1159 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 SEL1L3Q68CR1 1132 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 KCTD4Q8WVF5 259 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 GATA6Q92908 595 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 EMID1Q96A84 441 aaPredicted RBP11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 HDAC11Q96DB2 347 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 DCUN1D1Q96GG9 259 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 CSPG4P5Q96PW8 444 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 TRAPPC9Q96Q05 1148 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 CCDC106Q9BWC9 280 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 PCDHAC1Q9H158 963 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 TMEM134Q9H6X4 195 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 SSU72Q9NP77 194 aaKnown RBP11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 ARHGEF4Q9NR80 690 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 EPS15L1Q9UBC2 864 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 COPG2Q9UBF2 871 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 SYNPO2Q9UMS6 1093 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 AP4B1Q9Y6B7 739 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 SAC3D1A6NKF1 404 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 ARF4P18085 180 aaPredicted RBP11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 XRCC1P18887 633 aaPredicted RBP11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 HDCP19113 662 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 EEF1B2P24534 225 aaKnown RBP11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 PLOD1Q02809 727 aaPredicted RBP11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 MPP3Q13368 585 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 KCTD21Q4G0X4 260 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 HSF5Q4G112 596 aaPredicted RBP11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 FAM219BQ5XKK7 198 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 NUP93Q8N1F7 819 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 ZNF513Q8N8E2 541 aaPredicted RBP11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 KYQ8NBH2 561 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 FAM167AQ96KS9 214 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 TLE6Q9H808 572 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 NMRAL1Q9HBL8 299 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 DMAP1Q9NPF5 467 aaPredicted RBP11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 DTLQ9NZJ0 730 aa11.28□□□□□ -0.6
NECTIN4-201ENST00000368012 NEMP2A6NFY4 417 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 FOXD2O60548 495 aaPredicted RBP11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 TRIM13O60858 407 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 C2P06681 752 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 IQCF3P0C7M6 154 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 ARSAP15289 507 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 ITGAXP20702 1163 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 LMO2P25791 158 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 GABRB2P47870 512 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 NDUFV1P49821 464 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 SNX16P57768 344 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 TPI1P60174 286 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 FBXO48Q5FWF7 155 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 METTL7BQ6UX53 244 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 TTC30AQ86WT1 665 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 MYO1HQ8N1T3 1032 aa11.27□□□□□ -0.6
NECTIN4-201ENST00000368012 OR6P1Q8NGX9 317 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms