RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 ZNF670Q9BS34 389 aa11.7□□□□□ -0.54
RD3-201ENST00000367002 NMRK2Q9NPI5 230 aa11.7□□□□□ -0.54
RD3-201ENST00000367002 PCDHB8Q9UN66 801 aa11.7□□□□□ -0.54
RD3-201ENST00000367002 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.7□□□□□ -0.54
RD3-201ENST00000367002 BCL9LQ86UU0 1499 aa11.7□□□□□ -0.54
RD3-201ENST00000367002 SPDYE5A6NIY4 337 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 GOT1P17174 413 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 DNAJB2P25686 324 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 SPDYE7PQ495Y7 208 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 CELF3Q5SZQ8 465 aaKnown RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 LRRC8DQ7L1W4 858 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 ALYREFQ86V81 257 aaKnown RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 NETO2Q8NC67 525 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 NKD2Q969F2 451 aaPredicted RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 RMND5BQ96G75 393 aaPredicted RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 SENP8Q96LD8 212 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 NSMCE2Q96MF7 247 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 TRAPPC9Q96Q05 1148 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 PPP1R10Q96QC0 940 aaKnown RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 CPXM1Q96SM3 734 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 GAD1Q99259 594 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 SLC25A23Q9BV35 468 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 C12orf65Q9H3J6 166 aaKnown RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 WDR41Q9HAD4 459 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 PIDD1Q9HB75 910 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 ZFYVE28Q9HCC9 887 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 SIX2Q9NPC8 291 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 TEKT2Q9UIF3 430 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 SH3BP1Q9Y3L3 701 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 RAD54BQ9Y620 910 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 ZMYM2Q9UBW7 1377 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 ANKRD26Q9UPS8 1709 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 FAM95CA0A1B0GW59 222 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 CBX4O00257 560 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 LRCH4O75427 683 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 ITGA2BP08514 1039 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 PPIDQ08752 370 aaKnown RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 TRIM16LQ309B1 348 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 ACMSDQ8TDX5 336 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 ACE2Q9BYF1 805 aaPredicted RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 DMAP1Q9NPF5 467 aaPredicted RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 GRHL1Q9NZI5 618 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 DSEQ9UL01 958 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 PLA2G4CQ9UP65 541 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 CRYL1Q9Y2S2 319 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 M0R2N6 131 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 BDNFP23560 247 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 HIRAP54198 1017 aaPredicted RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 RIPK1Q13546 671 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 NRF1Q16656 503 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 SAMD4BQ5PRF9 694 aaKnown RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 WSCD1Q658N2 575 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 PKN3Q6P5Z2 889 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 FBXO39Q8N4B4 442 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 SMARCD1Q96GM5 515 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 DCUN1D5Q9BTE7 237 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 PHACTR1Q9C0D0 580 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 NMUR2Q9GZQ4 415 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 VTA1Q9NP79 307 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 ARL8BQ9NVJ2 186 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 IMPAD1Q9NX62 359 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 C2CD2Q9Y426 696 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 RIPK3Q9Y572 518 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 SLIT3O75094 1523 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 HDAC3O15379 428 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 CELF2O95319 508 aaKnown RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 FCGR1AP12314 374 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 PTPN1P18031 435 aaKnown RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 ERCC2P18074 760 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 ATP6V1C1P21283 382 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 PTGIRP43119 386 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 RUNX1T1Q06455 604 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 UBAP2LQ14157 1087 aaKnown RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 TRIM60Q495X7 471 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 GJC2Q5T442 439 aaPredicted RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 TAF2Q6P1X5 1199 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 RIOX2Q8IUF8 465 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 MIER2Q8N344 545 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 ANKRD52Q8NB46 1076 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 ST6GALNAC4Q9H4F1 302 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 SEPT3Q9UH03 358 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 NOCTQ9UK39 431 aaKnown RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 RPL26L1Q9UNX3 145 aaKnown RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 EFR3BQ9Y2G0 817 aa11.69□□□□□ -0.54
RD3-201ENST00000367002 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.69□□□□□ -0.54
RD3-201ENST00000367002 UMODL1Q5DID0 1318 aa11.68□□□□□ -0.54
RD3-201ENST00000367002 ATXN2Q99700 1313 aaKnown RBP11.68□□□□□ -0.54
RD3-201ENST00000367002 A8MUI8 341 aa11.68□□□□□ -0.54
RD3-201ENST00000367002 PRR5-ARHGAP8B1AHC4 643 aa11.68□□□□□ -0.54
RD3-201ENST00000367002 PSMD12O00232 456 aaPredicted RBP11.68□□□□□ -0.54
RD3-201ENST00000367002 PEX1O43933 1283 aa11.68□□□□□ -0.54
RD3-201ENST00000367002 RAD23AP54725 363 aa11.68□□□□□ -0.54
RD3-201ENST00000367002 ARHGAP8P85298 464 aa11.68□□□□□ -0.54
RD3-201ENST00000367002 SLC35G1Q2M3R5 365 aa11.68□□□□□ -0.54
RD3-201ENST00000367002 ELMSAN1Q6PJG2 1045 aa11.68□□□□□ -0.54
RD3-201ENST00000367002 ABHD15Q6UXT9 468 aa11.68□□□□□ -0.54
RD3-201ENST00000367002 ZNF572Q7Z3I7 529 aaPredicted RBP11.68□□□□□ -0.54
RD3-201ENST00000367002 PATL1Q86TB9 770 aaKnown RBP11.68□□□□□ -0.54
RD3-201ENST00000367002 MYO1HQ8N1T3 1032 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms