RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 IARS2Q9NSE4 1012 aaKnown RBP13.67□□□□□ -0.22
NCDN-201ENST00000356090 STK32BQ9NY57 414 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 GTSE1Q9NYZ3 720 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 BFARQ9NZS9 450 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 ITGA11Q9UKX5 1188 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 LY75O60449 1722 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 KPNA7A9QM74 516 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 TK2O00142 265 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 MCCD1P59942 119 aaPredicted RBP13.67□□□□□ -0.22
NCDN-201ENST00000356090 PDK1Q15118 436 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 FBXL19Q6PCT2 694 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 BNC2Q6ZN30 1099 aaPredicted RBP13.67□□□□□ -0.22
NCDN-201ENST00000356090 TRIML2Q8N7C3 387 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 MCUQ8NE86 351 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 REPS2Q8NFH8 660 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 SNRNP27Q8WVK2 155 aaKnown RBP13.67□□□□□ -0.22
NCDN-201ENST00000356090 MFSD3Q96ES6 412 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 MRPL1Q9BYD6 325 aaKnown RBP13.67□□□□□ -0.22
NCDN-201ENST00000356090 AP4B1Q9Y6B7 739 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 COL2A1P02458 1487 aaPredicted RBP13.67□□□□□ -0.22
NCDN-201ENST00000356090 C1QAP02745 245 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 L1CAMP32004 1257 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 SPRP35270 261 aaPredicted RBP13.67□□□□□ -0.22
NCDN-201ENST00000356090 THOP1P52888 689 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 RABGGTBP53611 331 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 EN1Q05925 392 aaPredicted RBP13.67□□□□□ -0.22
NCDN-201ENST00000356090 TREML2Q5T2D2 321 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 LCLAT1Q6UWP7 414 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 PCDH20Q8N6Y1 951 aaKnown RBP13.67□□□□□ -0.22
NCDN-201ENST00000356090 ACTRT2Q8TDY3 377 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 SORT1Q99523 831 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 OMDQ99983 421 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 ILKAPQ9H0C8 392 aaPredicted RBP13.67□□□□□ -0.22
NCDN-201ENST00000356090 TRPV6Q9H1D0 765 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 C1orf21Q9H246 121 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 R3HDMLQ9H3Y0 253 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 GBA2Q9HCG7 927 aaPredicted RBP13.67□□□□□ -0.22
NCDN-201ENST00000356090 SORCS3Q9UPU3 1222 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 COMMD3-BMI1R4GMX3 469 aa13.67□□□□□ -0.22
NCDN-201ENST00000356090 SOWAHBA6NEL2 793 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 PIGNO95427 931 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 ZFXP17010 805 aaPredicted RBP13.66□□□□□ -0.22
NCDN-201ENST00000356090 PGAM1P18669 254 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 XRCC1P18887 633 aaPredicted RBP13.66□□□□□ -0.22
NCDN-201ENST00000356090 CNTFP26441 200 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 PRAMEP78395 509 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 TLR1Q15399 786 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 ATG14Q6ZNE5 492 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 KYQ8NBH2 561 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 TTC16Q8NEE8 873 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 CYP3A43Q9HB55 503 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 DDX43Q9NXZ2 648 aaKnown RBP13.66□□□□□ -0.22
NCDN-201ENST00000356090 KLK14Q9P0G3 267 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 PCDHGB4Q9UN71 923 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 PCDHGB5Q9Y5G0 923 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 ONECUT3O60422 494 aaPredicted RBP13.66□□□□□ -0.22
NCDN-201ENST00000356090 INSRRP14616 1297 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 ARF4P18085 180 aaPredicted RBP13.66□□□□□ -0.22
NCDN-201ENST00000356090 HMGB2P26583 209 aaKnown RBP13.66□□□□□ -0.22
NCDN-201ENST00000356090 PIK3R1P27986 724 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 USP46P62068 366 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 POU5F1BQ06416 359 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 GRM1Q13255 1194 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 USP10Q14694 798 aaKnown RBP13.66□□□□□ -0.22
NCDN-201ENST00000356090 SOWAHAQ2M3V2 549 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 SLC9A4Q6AI14 798 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 OLFML1Q6UWY5 402 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 NAPRTQ6XQN6 538 aa13.66□□□□□ -0.22
NCDN-201ENST00000356090 PRMT7Q9NVM4 692 aaPredicted RBP13.66□□□□□ -0.22
NCDN-201ENST00000356090 CCNT2O60583 730 aaKnown RBP13.65□□□□□ -0.22
NCDN-201ENST00000356090 TRIM13O60858 407 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 IL1BP01584 269 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 CYLC2Q14093 348 aaPredicted RBP13.65□□□□□ -0.22
NCDN-201ENST00000356090 CERCAMQ5T4B2 595 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 POTEAQ6S8J7 498 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 TMC7Q7Z402 723 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 DEFB106AQ8N104 65 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 DNERQ8NFT8 737 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 APBB2Q92870 758 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 NPAS2Q99743 824 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 FAM96AQ9H5X1 160 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 CAAP1Q9H8G2 361 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 PDGFCQ9NRA1 345 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 TNFSF13BQ9Y275 285 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 SF3B1O75533 1304 aaKnown RBP eCLIP13.65□□□□□ -0.22
NCDN-201ENST00000356090 GCATO75600 419 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 OAZ1P54368 228 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 SNX16P57768 344 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 PITX1P78337 314 aaPredicted RBP13.65□□□□□ -0.22
NCDN-201ENST00000356090 MBTD1Q05BQ5 628 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 TTLL12Q14166 644 aaPredicted RBP13.65□□□□□ -0.22
NCDN-201ENST00000356090 FAM91A1Q658Y4 838 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 SEL1L3Q68CR1 1132 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 KRT80Q6KB66 452 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 FSTL4Q6MZW2 842 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 CYP2R1Q6VVX0 501 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 ILDR2Q71H61 639 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 SPNS2Q8IVW8 549 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 DSELQ8IZU8 1212 aa13.65□□□□□ -0.22
NCDN-201ENST00000356090 CDH19Q9H159 772 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms