RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ATP13A3Q9H7F0 1226 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 CPNE5Q9HCH3 593 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 TESMINQ9Y4I5 508 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 MAST2Q6P0Q8 1798 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 H7C0C1 242 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 ACOT8O14734 319 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 TRIM49P0CI25 452 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 TRIM49CP0CI26 452 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 CES1P23141 567 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 NAMPTP43490 491 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 KCNA1Q09470 495 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 RALGDSQ12967 914 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 STILQ15468 1287 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 TTC39BQ5VTQ0 682 aaPredicted RBP16.09■□□□□ 0.17
RTN3-205ENST00000356000 IQSEC1Q6DN90 963 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 GLRX5Q86SX6 157 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 ARHGEF19Q8IW93 802 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 SNTG2Q9NY99 539 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 TCAF1Q9Y4C2 921 aa16.09■□□□□ 0.17
RTN3-205ENST00000356000 MROH5Q6ZUA9 1318 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 AURKAO14965 403 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 DCXO43602 365 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 KCNH1O95259 989 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 KRT5P13647 590 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 ME2P23368 584 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 LEPRP48357 1165 aaKnown RBP16.08■□□□□ 0.17
RTN3-205ENST00000356000 NUDT2P50583 147 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 DLG2Q15700 870 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 TEDDM1Q5T9Z0 273 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 SNX29P2Q8IUI4 249 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 HERC6Q8IVU3 1022 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.08■□□□□ 0.17
RTN3-205ENST00000356000 KYQ8NBH2 561 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 RAB2BQ8WUD1 216 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 MMP19Q99542 508 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 REEP2Q9BRK0 252 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 EFHD1Q9BUP0 239 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 PCDH9Q9HC56 1237 aa16.08■□□□□ 0.17
RTN3-205ENST00000356000 PSTPIP1O43586 416 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 ITIH1P19827 911 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 ARMC8Q8IUR7 673 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 KATNAL2Q8IYT4 538 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 DSELQ8IZU8 1212 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 SYNE4Q8N205 404 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 FNIP1Q8TF40 1166 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 S100ZQ8WXG8 99 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 LRTOMTQ8WZ04 291 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 TTC9Q92623 222 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 CELF1Q92879 486 aaKnown RBP16.08■□□□□ 0.16
RTN3-205ENST00000356000 ATP6V1E2Q96A05 226 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.08■□□□□ 0.16
RTN3-205ENST00000356000 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.08■□□□□ 0.16
RTN3-205ENST00000356000 ENPP5Q9UJA9 477 aa16.08■□□□□ 0.16
RTN3-205ENST00000356000 DICER1Q9UPY3 1922 aaKnown RBP16.07■□□□□ 0.16
RTN3-205ENST00000356000 TESPA1A2RU30 521 aaPredicted RBP16.07■□□□□ 0.16
RTN3-205ENST00000356000 SNTNA6NMZ2 147 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 AIM2O14862 343 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 ZBTB14O43829 449 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 LYPLA1O75608 230 aaPredicted RBP16.07■□□□□ 0.16
RTN3-205ENST00000356000 CPNE6O95741 557 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 EEF1DP29692 281 aaKnown RBP16.07■□□□□ 0.16
RTN3-205ENST00000356000 RAD23AP54725 363 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 CTSWP56202 376 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.07■□□□□ 0.16
RTN3-205ENST00000356000 ANGEL2Q5VTE6 544 aaKnown RBP16.07■□□□□ 0.16
RTN3-205ENST00000356000 KIAA1841Q6NSI8 718 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 IDO2Q6ZQW0 420 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 SLC22A16Q86VW1 577 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 CCDC28AQ8IWP9 274 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 PPIL6Q8IXY8 311 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 CHAC2Q8WUX2 184 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 SDCCAG3Q96C92 435 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 CIB1Q99828 191 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 SLC4A5Q9BY07 1137 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 STMN3Q9NZ72 180 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 DSEQ9UL01 958 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 FADS2P1A8MWK0 482 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 SNAP23O00161 211 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 ZNF195O14628 629 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 POLR1CO15160 346 aaPredicted RBP16.07■□□□□ 0.16
RTN3-205ENST00000356000 GCNT3O95395 438 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 GNAO1P09471 354 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 IL4RP24394 825 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 PKLRP30613 574 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 ETFBP38117 255 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 MAPK10P53779 464 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 PRKAA2P54646 552 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 GALK2Q01415 458 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 HERC3Q15034 1050 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 ANKRD22Q5VYY1 191 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 ACAD10Q6JQN1 1059 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 LINC00299Q6ZSB3 139 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 TPH2Q8IWU9 490 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 SPARTQ8N0X7 666 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 PARP8Q8N3A8 854 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 TTLL6Q8N841 843 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 SNX18Q96RF0 628 aa16.07■□□□□ 0.16
RTN3-205ENST00000356000 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.07■□□□□ 0.16
RTN3-205ENST00000356000 EIF3LQ9Y262 564 aaKnown RBP16.07■□□□□ 0.16
RTN3-205ENST00000356000 TCRBV9S1A1TA0A576 114 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms